RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 SH2B3Q9UQQ2 575 aa4.6□□□□□ -1.67
AP3S1-209ENST00000640413 POC1B-GALNT4F8VUJ3 575 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 EXOC3O60645 756 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 ALPLP05186 524 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 PRF1P14222 555 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 IARSP41252 1262 aaKnown RBP4.59□□□□□ -1.67
AP3S1-209ENST00000640413 PIK3CGP48736 1102 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 KIF22Q14807 665 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 RBMS2Q15434 407 aaKnown RBP4.59□□□□□ -1.67
AP3S1-209ENST00000640413 DLK2Q6UY11 383 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 GALNT4Q8N4A0 578 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 FAM46DQ8NEK8 389 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 C1orf162Q8NEQ5 155 aaPredicted RBP4.59□□□□□ -1.67
AP3S1-209ENST00000640413 COA7Q96BR5 231 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 COQ8BQ96D53 544 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 SIK2Q9H0K1 926 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 MKS1Q9NXB0 559 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 CCNL1Q9UK58 526 aaPredicted RBP4.59□□□□□ -1.67
AP3S1-209ENST00000640413 SSX2IPQ9Y2D8 614 aa4.59□□□□□ -1.67
AP3S1-209ENST00000640413 LY6G6EA0A0G2JKS1 128 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 FAM90A10PA6NDY2 464 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHGA12O60330 932 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PRDX5P30044 214 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 DSC2Q02487 901 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 CERKLQ49MI3 558 aaPredicted RBP4.58□□□□□ -1.68
AP3S1-209ENST00000640413 KIRREL2Q6UWL6 708 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 TTC7BQ86TV6 843 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 GLG1Q92896 1179 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 R3HDM4Q96D70 268 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 SLC46A1Q96NT5 459 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 FAM118BQ9BPY3 351 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 FAM126AQ9BYI3 521 aaPredicted RBP4.58□□□□□ -1.68
AP3S1-209ENST00000640413 TTYH3Q9C0H2 523 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 SLKQ9H2G2 1235 aaPredicted RBP4.58□□□□□ -1.68
AP3S1-209ENST00000640413 SERPINB13Q9UIV8 391 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 TBX22Q9Y458 520 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHGA9Q9Y5G4 932 aaKnown RBP4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHGA8Q9Y5G5 932 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHGA7Q9Y5G6 932 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHGA6Q9Y5G7 932 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHGA3Q9Y5H0 932 aa4.58□□□□□ -1.68
AP3S1-209ENST00000640413 H7C1Q1 480 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 MT-CO1P00395 513 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 RPLP2P05387 115 aaKnown RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 TMEM191BP0C7N4 346 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 HOXD9P28356 352 aaPredicted RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 CNGA1P29973 690 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 THBS3P49746 956 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 NANOS2P60321 138 aaKnown RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 GPSM2P81274 684 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 ARHGAP40Q5TG30 622 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 SFRP4Q6FHJ7 346 aaPredicted RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 SERPINA13PQ6UXR4 307 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 Q6ZWC4 215 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 FAM90A1Q86YD7 464 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 CBARPQ8N350 705 aaPredicted RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 TERB1Q8NA31 727 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 ATL2Q8NHH9 583 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 RP9Q8TA86 221 aaKnown RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 XAGE5Q8WWM1 108 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 ATG4AQ8WYN0 398 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 TNPO1Q92973 898 aaKnown RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 FOXP1Q9H334 677 aaPredicted RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 GLOD4Q9HC38 313 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 PCDHA3Q9Y5H8 950 aa4.57□□□□□ -1.68
AP3S1-209ENST00000640413 CFAP20Q9Y6A4 193 aaKnown RBP4.57□□□□□ -1.68
AP3S1-209ENST00000640413 A1L4Q6 167 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 KLHL33A6NCF5 533 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 CD8B2A6NJW9 211 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 DCLK1O15075 740 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 XPOTO43592 962 aaKnown RBP4.56□□□□□ -1.68
AP3S1-209ENST00000640413 HTRA4P83105 476 aaPredicted RBP4.56□□□□□ -1.68
AP3S1-209ENST00000640413 GTF2H3Q13889 308 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 ZNF268Q14587 947 aaPredicted RBP4.56□□□□□ -1.68
AP3S1-209ENST00000640413 INAVAQ3KP66 663 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 FAM160B1Q5W0V3 765 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 CNTD1Q8N815 330 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 FAXDC2Q96IV6 333 aa4.56□□□□□ -1.68
AP3S1-209ENST00000640413 LENG8Q96PV6 779 aaPredicted RBP4.56□□□□□ -1.68
AP3S1-209ENST00000640413 PHLDB1Q86UU1 1377 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 DSCR3O14972 297 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 USP1O94782 785 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 ABLIM3O94929 683 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 GNAI2P04899 355 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 KCNJ5P48544 419 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 RENBPP51606 427 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 ALDH5A1P51649 535 aaPredicted RBP4.55□□□□□ -1.68
AP3S1-209ENST00000640413 TWIST1Q15672 202 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 UAP1L1Q3KQV9 507 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 LEXMQ3ZCV2 418 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 L1TD1Q5T7N2 865 aaKnown RBP4.55□□□□□ -1.68
AP3S1-209ENST00000640413 LAYNQ6UX15 382 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 ABHD11Q8NFV4 315 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 THAP7Q9BT49 309 aaPredicted RBP4.55□□□□□ -1.68
AP3S1-209ENST00000640413 EFHD1Q9BUP0 239 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 HESX1Q9UBX0 185 aa4.55□□□□□ -1.68
AP3S1-209ENST00000640413 UBE2Q2LH0YL09 131 aa4.54□□□□□ -1.68
AP3S1-209ENST00000640413 OAZ2O95190 189 aa4.54□□□□□ -1.68
AP3S1-209ENST00000640413 CHRM5P08912 532 aaPredicted RBP4.54□□□□□ -1.68
AP3S1-209ENST00000640413 HTR6P50406 440 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms