RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 CCDC142Q17RM4 750 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 TUBB8Q3ZCM7 444 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 TFDP3Q5H9I0 405 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 HIBCHQ6NVY1 386 aaPredicted RBP19.88■□□□□ 0.77
CLN5-216ENST00000636780 UNC45BQ8IWX7 931 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 CACNA2D3Q8IZS8 1091 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 CCDC89Q8N998 374 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 C3orf20Q8ND61 904 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 PPM1EQ8WY54 764 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 SLC10A4Q96EP9 437 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 PEBP4Q96S96 227 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 B3GNT5Q9BYG0 378 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 TNFSF13BQ9Y275 285 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 NR2E3Q9Y5X4 410 aa19.88■□□□□ 0.77
CLN5-216ENST00000636780 GOLGA6L7A0A1B0GV03 622 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 TJP3O95049 919 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 SLC25A11Q02978 314 aaKnown RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 PTPN11Q06124 597 aaPredicted RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 ENPEPQ07075 957 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 TFDP1Q14186 410 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 FAM102AQ5T9C2 384 aaPredicted RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 SPOCK2Q92563 424 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 C2orf40Q9H1Z8 148 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 LAMA3Q16787 3333 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 IBSPP21815 317 aaPredicted RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 EIF4BP23588 611 aaKnown RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 MIPP30301 263 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 PPIL2Q13356 520 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 C4orf33Q8N1A6 199 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 C18orf25Q96B23 403 aaPredicted RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 ZMAT2Q96NC0 199 aaKnown RBP19.87■□□□□ 0.77
CLN5-216ENST00000636780 VPS37BQ9H9H4 285 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 GJD2Q9UKL4 321 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 CEP83Q9Y592 693 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 NME7Q9Y5B8 376 aa19.87■□□□□ 0.77
CLN5-216ENST00000636780 PDHXO00330 501 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 PAEPP09466 180 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 TFE3P19532 575 aaPredicted RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 TNFAIP8L3Q5GJ75 292 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 GKAP1Q5VSY0 366 aaPredicted RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 FAM71DQ8N9W8 422 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 C16orf70Q9BSU1 422 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 E5RJQ4 531 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 H3BRB1 525 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 SNAI1O95863 264 aaPredicted RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 IGFBP6P24592 240 aaPredicted RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 GCAP28676 217 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 SSTR1P30872 391 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 ATXN1P54253 815 aaKnown RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 SPDYCQ5MJ68 293 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 SCYL2Q6P3W7 929 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.86■□□□□ 0.77
CLN5-216ENST00000636780 ACOT1Q86TX2 421 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 ALLCQ8N6M5 410 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 TMEM176AQ96HP8 235 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 CFAP57Q96MR6 1250 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 RUNDC3BQ96NL0 473 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 EIF2AQ9BY44 585 aaKnown RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 TUT1Q9H6E5 874 aaKnown RBP19.86■□□□□ 0.77
CLN5-216ENST00000636780 SNTG2Q9NY99 539 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 KLK14Q9P0G3 267 aa19.86■□□□□ 0.77
CLN5-216ENST00000636780 AKAP5P24588 427 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 PDIA2Q13087 525 aaKnown RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 OASLQ15646 514 aaKnown RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 FAM133BQ5BKY9 247 aaKnown RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 FNBP1LQ5T0N5 605 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 MARCH8Q5T0T0 291 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 SCUBE3Q8IX30 993 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 KCTD6Q8NC69 237 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 MAIP1Q8WWC4 291 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 KIF12Q96FN5 646 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 KLF6Q99612 283 aaPredicted RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 CNOT10Q9H9A5 744 aaKnown RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 CACNG4Q9UBN1 327 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 F5H423 210 aaPredicted RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 GBP1P32455 592 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 OR6B2Q6IFH4 312 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 CCDC121Q6ZUS5 278 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 FAM47EQ6ZV65 393 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 RFX6Q8HWS3 928 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 RBM41Q96IZ5 413 aaKnown RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 MRPL45Q9BRJ2 306 aaKnown RBP19.85■□□□□ 0.77
CLN5-216ENST00000636780 MIS12Q9H081 205 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 PCDHGC3Q9UN70 934 aa19.85■□□□□ 0.77
CLN5-216ENST00000636780 SIP14410 1827 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 A0A1W2PPM1 405 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 BTBD19C9JJ37 291 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 CILPO75339 1184 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 SMPD1P17405 629 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 GPD2P43304 727 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 PHKA2P46019 1235 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 YWHAEP62258 255 aaKnown RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 PKN2Q16513 984 aaKnown RBP19.84■□□□□ 0.77
CLN5-216ENST00000636780 FAXCQ5TGI0 409 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 NUGGCQ68CJ6 796 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 KCNV1Q6PIU1 500 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 C1orf228Q6PIY5 440 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 SESTD1Q86VW0 696 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 SYT17Q9BSW7 474 aa19.84■□□□□ 0.77
CLN5-216ENST00000636780 BCO2Q9BYV7 579 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms