RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	VTN	P04004	478 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	HMGCR	P04035	888 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SHBG	P04278	402 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	EDN1	P05305	212 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	ZNF200	P98182	395 aa	Predicted RBP	11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	STRN3	Q13033	797 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MFSD5	Q6N075	450 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CXCL17	Q6UXB2	119 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	INPP5D	Q92835	1189 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	CCDC28B	Q9BUN5	200 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	GOLPH3	Q9H4A6	298 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	LRRC4C	Q9HCJ2	640 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	XPNPEP3	Q9NQH7	507 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	NKX1-2	Q9UD57	310 aa	Predicted RBP	11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	MTRF1L	Q9UGC7	380 aa	Known RBP	11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	LRCH1	Q9Y2L9	728 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	SLC4A7	Q9Y6M7	1214 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	COL1A2	P08123	1366 aa		11.27	□□□□□ -0.6
ARHGEF9-223	ENST00000636102	NRCAM	Q92823	1304 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	RRN3P2	A6NIE6	340 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	HNRNPDL	O14979	420 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MAP3K13	O43283	966 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ITGA4	P13612	1032 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CTNNA2	P26232	953 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GPC3	P51654	580 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PPP3CA	Q08209	521 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PABPC1L	Q4VXU2	614 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MAP3K21	Q5TCX8	1036 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	SMYD5	Q6GMV2	418 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PPP1R2P3	Q6NXS1	205 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	KIAA0319L	Q8IZA0	1049 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	FITM2	Q8N6M3	262 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PXYLP1	Q8TE99	480 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	SHC3	Q92529	594 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GRAMD1A	Q96CP6	724 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZBTB45	Q96K62	511 aa	Predicted RBP	11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZSWIM1	Q9BR11	485 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TARS2	Q9BW92	718 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	UPF3A	Q9H1J1	476 aa	Known RBP	11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	VCX3B	Q9H321	246 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TMEM134	Q9H6X4	195 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	SPC25	Q9HBM1	224 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TMEM8A	Q9HCN3	771 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	VCX3A	Q9NNX9	186 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZDHHC18	Q9NUE0	388 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	DLGAP2	Q9P1A6	1054 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ATXN10	Q9UBB4	475 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GTF3C4	Q9UKN8	822 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TMCO1	Q9UM00	188 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	AKT3	Q9Y243	479 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TRIM17	Q9Y577	477 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PCDHGA4	Q9Y5G9	962 aa		11.27	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	KIAA0391	O15091	583 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ADAMTS4	O75173	837 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CSDE1	O75534	798 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PDHA1	P08559	390 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	LIG4	P49917	911 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	POLE2	P56282	527 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PRPF4B	Q13523	1007 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ARHGEF6	Q15052	776 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	LCA5	Q86VQ0	697 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	POMGNT1	Q8WZA1	660 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	NCSTN	Q92542	709 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	DHX38	Q92620	1227 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	KCNN1	Q92952	543 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	UTP4	Q969X6	686 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ARHGEF26	Q96DR7	871 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TRIM11	Q96F44	468 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	BEGAIN	Q9BUH8	593 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TMEM117	Q9H0C3	514 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MINDY3	Q9H8M7	445 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	KIAA1586	Q9HCI6	787 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102		A0A087WZ62	844 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MSC	O60682	206 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	LRRN2	O75325	713 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CYP1A2	P05177	515 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	FAM163B	P0C2L3	166 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	IQCF3	P0C7M6	154 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MAN1A1	P33908	653 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GCLM	P48507	274 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	EFNA5	P52803	228 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	IFI35	P80217	286 aa	Predicted RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	SFSWAP	Q12872	951 aa	Known RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TFDP1	Q14186	410 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	KCNA10	Q16322	511 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CYP1B1	Q16678	543 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	C1QTNF12	Q5T7M4	302 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ARMC3	Q5W041	872 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZNF677	Q86XU0	584 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	EPS8L1	Q8TE68	723 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	LZIC	Q8WZA0	190 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	AZIN2	Q96A70	460 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	FBXL18	Q96ME1	805 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	NT5C1B	Q96P26	610 aa		11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.26	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	HAPLN2	Q9GZV7	340 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms