RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 LPAL2Q16609 132 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 CC2D1AQ6P1N0 951 aaPredicted RBP13.53□□□□□ -0.24
PTPN11-206ENST00000635652 PRR23BQ6ZRT6 265 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 Q6ZS52 159 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 OSTM1Q86WC4 334 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 GPR161Q8N6U8 529 aaKnown RBP13.53□□□□□ -0.24
PTPN11-206ENST00000635652 RDH13Q8NBN7 331 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 OR5B17Q8NGF7 314 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 SPATA18Q8TC71 538 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 LEO1Q8WVC0 666 aaPredicted RBP13.53□□□□□ -0.24
PTPN11-206ENST00000635652 TRIM9Q9C026 710 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 KIAA1586Q9HCI6 787 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 TDP1Q9NUW8 608 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 NCOR2Q9Y618 2525 aa13.53□□□□□ -0.24
PTPN11-206ENST00000635652 CHURC1-FNTBB4DL54 471 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 GABRDO14764 452 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 POLR2DO15514 142 aaKnown RBP13.52□□□□□ -0.25
PTPN11-206ENST00000635652 YEATS4O95619 227 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 HSP90AA1P07900 732 aaKnown RBP13.52□□□□□ -0.25
PTPN11-206ENST00000635652 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
PTPN11-206ENST00000635652 TNNI1P19237 187 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 HOXD13P35453 343 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 FNTBP49356 437 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 RUNX3Q13761 415 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 RSPO4Q2I0M5 234 aaPredicted RBP13.52□□□□□ -0.25
PTPN11-206ENST00000635652 WDR44Q5JSH3 913 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 FAM26FQ5R3K3 315 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 HEATR6Q6AI08 1181 aaKnown RBP13.52□□□□□ -0.25
PTPN11-206ENST00000635652 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 SHC4Q6S5L8 630 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 MON1AQ86VX9 555 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 USP13Q92995 863 aaPredicted RBP13.52□□□□□ -0.25
PTPN11-206ENST00000635652 MMS19Q96T76 1030 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 PKMYT1Q99640 499 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 EBF3Q9H4W6 596 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 TRPC7Q9HCX4 862 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 USP18Q9UMW8 372 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 PTPRJQ12913 1337 aa13.52□□□□□ -0.25
PTPN11-206ENST00000635652 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 CLIC2O15247 247 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 EIF3DO15371 548 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 ATP2C2O75185 946 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 NOL4O94818 638 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 PDGFRBP09619 1106 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 LMO2P25791 158 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 CYP2J2P51589 502 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 PSMC1P62191 440 aaKnown RBP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 DMWDQ09019 674 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 CCINQ13939 588 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 C4orf50Q6ZRC1 276 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 WDR49Q8IV35 697 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 NELFCDQ8IXH7 590 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 SYNPOQ8N3V7 929 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 FUBP3Q96I24 572 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 FNBP1Q96RU3 617 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 C7orf25Q9BPX7 421 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 KIF9Q9HAQ2 790 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 MAGEC2Q9UBF1 373 aaPredicted RBP13.51□□□□□ -0.25
PTPN11-206ENST00000635652 ANAPC1Q9H1A4 1944 aa13.51□□□□□ -0.25
PTPN11-206ENST00000635652 TRAV19A0A0A6YYK7 116 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 OTOL1A6NHN0 477 aaPredicted RBP13.5□□□□□ -0.25
PTPN11-206ENST00000635652 CKMP06732 381 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 ARSAP15289 507 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 CASP1P29466 404 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 ME1P48163 572 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 AMPD2Q01433 879 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 CYP27A1Q02318 531 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 GRSF1Q12849 480 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN11-206ENST00000635652 LAIR1Q6GTX8 287 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 FAM171BQ6P995 826 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
PTPN11-206ENST00000635652 HS2ST1Q7LGA3 356 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 TRAPPC11Q7Z392 1133 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 LONP2Q86WA8 852 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 FSIP1Q8NA03 581 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 MYLPFQ96A32 169 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 TRMT2BQ96GJ1 504 aaKnown RBP13.5□□□□□ -0.25
PTPN11-206ENST00000635652 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 CYP2S1Q96SQ9 504 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 BLZF1Q9H2G9 400 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 HPS4Q9NQG7 708 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 AGPAT3Q9NRZ7 376 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 C2orf42Q9NWW7 574 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 FAM13BQ9NYF5 915 aa13.5□□□□□ -0.25
PTPN11-206ENST00000635652 DLL3Q9NYJ7 618 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms