RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RBM23Q86U06 439 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SMG8Q8ND04 991 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 LMO3Q8TAP4 145 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 UBA3Q8TBC4 463 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZNF653Q96CK0 615 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 PBKQ96KB5 322 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 VPS18Q9P253 973 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 STXBP5LQ9Y2K9 1186 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SPOPO43791 374 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 CEP104O60308 925 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 MAGEA10P43363 369 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 NAA35Q5VZE5 725 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 KCNT2Q6UVM3 1135 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SLFN11Q7Z7L1 901 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 GDAP1L1Q96MZ0 367 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 CYP4F11Q9HBI6 524 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 MED4Q9NPJ6 270 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 PACSIN2Q9UNF0 486 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 C9IYK1 514 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 KIAA0355O15063 1070 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 EDN1P05305 212 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 ALDH1A3P47895 512 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 ARHGEF19Q8IW93 802 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 KAT5Q92993 513 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SLC9A7Q96T83 725 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 C11orf70Q9BRQ4 267 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 ADAM28Q9UKQ2 775 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 DERAQ9Y315 318 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 ARID2Q68CP9 1835 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 FTCDO95954 541 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 GLI1P08151 1106 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 MAATS1Q7Z4T9 603 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 VPS52Q8N1B4 723 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 TSEN2Q8NCE0 465 aaKnown RBP13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 RNF139Q8WU17 664 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 RAD9AQ99638 391 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 DDX3XO00571 662 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZNF623O75123 536 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 CXCL14O95715 111 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 LCP1P13796 627 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 PTPROQ16827 1216 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 PPP1R2P3Q6NXS1 205 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 LNX1Q8TBB1 728 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 CYP3A43Q9HB55 503 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 ADAM22Q9P0K1 906 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 NRP1O14786 923 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 MAPRE1Q15691 268 aaKnown RBP13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 SEL1L2Q5TEA6 688 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 LINC01465Q8N7H1 131 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 GTF3C4Q9UKN8 822 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 LCTP09848 1927 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 LRG1P02750 347 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 COL6A1P12109 1028 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 CTNNA2P26232 953 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 ECHS1P30084 290 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 GGCXP38435 758 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 LRRC52Q8N7C0 313 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 EMILIN2Q9BXX0 1053 aa13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 TRIP12Q14669 1992 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-207ENST00000628646 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZSCAN5CA6NGD5 496 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 CES2O00748 559 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 AP1G2O75843 785 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM200BP0CF97 657 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 NFE2Q16621 373 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLC39A12Q504Y0 691 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 DNAJC24Q6P3W2 148 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 DAAM2Q86T65 1068 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 CAVIN3Q969G5 261 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 STIM2Q9P246 746 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 MBTPS1Q14703 1052 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 PSMD5Q16401 504 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 GOLGA7BQ2TAP0 167 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 RNF40O75150 1001 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 LILRA4P59901 499 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 TRADDQ15628 312 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 GLE1Q53GS7 698 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 B3GALT6Q96L58 329 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
SYNGAP1-207ENST00000628646 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms