RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TRIM67Q6ZTA4 783 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 HFE2Q6ZVN8 426 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 RTL10Q7L3V2 364 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 ENOSF1Q7L5Y1 443 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 OTOP3Q7RTS5 596 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 UNC93AQ86WB7 457 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 B3GALNT2Q8NCR0 500 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 ZNF461Q8TAF7 563 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 SLC7A14Q8TBB6 771 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 PGLYRP2Q96PD5 576 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 NT5C1AQ9BXI3 368 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 UBE2TQ9NPD8 197 aaPredicted RBP15.67■□□□□ 0.1
PNKP-221ENST00000627317 RTN4Q9NQC3 1192 aaKnown RBP15.67■□□□□ 0.1
PNKP-221ENST00000627317 EPS15L1Q9UBC2 864 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 HMGXB4Q9UGU5 601 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 AFF4Q9UHB7 1163 aaKnown RBP15.67■□□□□ 0.1
PNKP-221ENST00000627317 RAPGEFL1Q9UHV5 662 aa15.67■□□□□ 0.1
PNKP-221ENST00000627317 WDFY4Q6ZS81 3184 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 A0A1B0GTH6 734 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 PRRG1O14668 218 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 CILPO75339 1184 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 VNN2O95498 520 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 TPM3P06753 285 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 ASGR2P07307 311 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 MFAP3P55082 362 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 APBA1Q02410 837 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 KCNMA1Q12791 1236 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 SMARCB1Q12824 385 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 GPR17Q13304 367 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 ORC1Q13415 861 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 MAPRE1Q15691 268 aaKnown RBP15.66■□□□□ 0.1
PNKP-221ENST00000627317 UVSSAQ2YD98 709 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 MDH1BQ5I0G3 518 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 GJB7Q6PEY0 223 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 RNF19BQ6ZMZ0 732 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 TCEAL8Q8IYN2 117 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 KAT5Q92993 513 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 MYADMQ96S97 322 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 SMOC2Q9H3U7 446 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 DPEP3Q9H4B8 488 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 SIX2Q9NPC8 291 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 ABI2Q9NYB9 513 aaPredicted RBP15.66■□□□□ 0.1
PNKP-221ENST00000627317 LIMD1Q9UGP4 676 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 GTF3C4Q9UKN8 822 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 SORCS3Q9UPU3 1222 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 NME7Q9Y5B8 376 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 PCDHB4Q9Y5E5 795 aa15.66■□□□□ 0.1
PNKP-221ENST00000627317 MUC6Q6W4X9 2439 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ATP2C2O75185 946 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ATF2P15336 505 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 PTPN1P18031 435 aaKnown RBP15.65■□□□□ 0.1
PNKP-221ENST00000627317 RFX1P22670 979 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 UBASH3AP57075 661 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ADCY1Q08828 1119 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 SIGLEC14Q08ET2 396 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ARHGAP44Q17R89 818 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 CCDC142Q17RM4 750 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ZNF394Q53GI3 561 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 PPM1LQ5SGD2 360 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 C4orf50Q6ZRC1 276 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 BMP8AQ7Z5Y6 402 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ACOT1Q86TX2 421 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 LRRTM3Q86VH5 581 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 SPATA2LQ8IUW3 424 aaPredicted RBP15.65■□□□□ 0.1
PNKP-221ENST00000627317 C2orf15Q8WU43 125 aaKnown RBP15.65■□□□□ 0.1
PNKP-221ENST00000627317 MYLPFQ96A32 169 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 KREMEN1Q96MU8 473 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ERGIC2Q96RQ1 377 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 RBSNQ9H1K0 784 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 CYP4F11Q9HBI6 524 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 PLCB1Q9NQ66 1216 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 CRTAC1Q9NQ79 661 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 FAM207AQ9NSI2 230 aaPredicted RBP15.65■□□□□ 0.1
PNKP-221ENST00000627317 IFNKQ9P0W0 207 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 MAFFQ9ULX9 164 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 SIK3Q9Y2K2 1263 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 PCDHB5Q9Y5E4 795 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 ATP8B3O60423 1300 aa15.65■□□□□ 0.1
PNKP-221ENST00000627317 MTCL1Q9Y4B5 1905 aaKnown RBP15.64■□□□□ 0.09
PNKP-221ENST00000627317 MYBPHLA2RUH7 354 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 TMEM221A6NGB7 291 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 M0R296 226 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 CCL16O15467 120 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 TEX33O43247 280 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 CBFA2T2O43439 604 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 SEC24AO95486 1093 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 KRT5P13647 590 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 KLK7P49862 253 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 CDR1P51861 262 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 NTHL1P78549 312 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 PLCB2Q00722 1185 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 CYP27A1Q02318 531 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 MTMR3Q13615 1198 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 RAPGEF1Q13905 1077 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 KLHDC7AQ5VTJ3 777 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 TMEM270Q6UE05 265 aa15.64■□□□□ 0.09
PNKP-221ENST00000627317 GRASPQ7Z6J2 395 aaPredicted RBP15.64■□□□□ 0.09
PNKP-221ENST00000627317 GAS2L3Q86XJ1 694 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms