RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 UTP6Q9NYH9 597 aaKnown RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SLX4Q8IY92 1834 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 SGK1O00141 431 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 GJB1P08034 283 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 GSTT2P0CG29 244 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 GSTT2BP0CG30 244 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
CDH1-214ENST00000621016 HSPA6P17066 643 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 RFX1P22670 979 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 ACTR2P61160 394 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 KRT76Q01546 638 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 DNAJC3Q13217 504 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 ZNF449Q6P9G9 518 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 MAP4K3Q8IVH8 894 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 PPFIBP2Q8ND30 876 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 TMEM121Q9BTD3 319 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 NKIRAS1Q9NYS0 192 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 UVRAGQ9P2Y5 699 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 NAALADL1Q9UQQ1 740 aa11.24□□□□□ -0.61
CDH1-214ENST00000621016 LTBP4Q8N2S1 1624 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 EXOC1LA0A1B0GW35 172 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 VWA5AO00534 786 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 OR6B1O95007 311 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 KRT1P04264 644 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 TNFSF9P41273 254 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 ADARP55265 1226 aaKnown RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 ATP6V0A1Q93050 837 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 CYP26B1Q9NR63 512 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 TMCO1Q9UM00 188 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 SLC12A4Q9UP95 1085 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 PRELID1Q9Y255 219 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 CFAP73A6NFT4 308 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 TTC4O95801 387 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 CST3P01034 146 aaPredicted RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 RXRGP48443 463 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 ARSEP51690 589 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 NCKAP1LP55160 1127 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 NFIL3Q16649 462 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 DPY19L2Q6NUT2 758 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 EXOC8Q8IYI6 725 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 ZBED8Q8IZ13 594 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 LRRC71Q8N4P6 559 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 C1orf131Q8NDD1 294 aaKnown RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 PSPC1Q8WXF1 523 aaKnown RBP11.23□□□□□ -0.61
CDH1-214ENST00000621016 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 DCLK3Q9C098 648 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 SLCO1B3Q9NPD5 702 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 NINJ2Q9NZG7 142 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 AGTPBP1Q9UPW5 1226 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 NUB1Q9Y5A7 615 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 PCDHB2Q9Y5E7 798 aa11.23□□□□□ -0.61
CDH1-214ENST00000621016 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 WDR46O15213 610 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 ITGA2BP08514 1039 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GHRP10912 638 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GTF2H1P32780 548 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GPC3P51654 580 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 JAK3P52333 1124 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 SP2Q02086 613 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GAD2Q05329 585 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 SEPT7Q16181 437 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 ANKRD35Q8N283 1001 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 CCDC33Q8N5R6 958 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 RUNDC3BQ96NL0 473 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 STMN4Q9H169 189 aaPredicted RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 SYNCQ9H7C4 482 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 SLC9A2Q9UBY0 812 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GGA2Q9UJY4 613 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 ZNF541Q9H0D2 1346 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 ZBTB7AO95365 584 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GM2AP17900 193 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 CCND2P30279 289 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 MTTPP55157 894 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 COG7P83436 770 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 ALCAMQ13740 583 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 EMC10Q5UCC4 262 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 FAAH2Q6GMR7 532 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 MFSD7Q6UXD7 560 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 TAS1R3Q7RTX0 852 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 EMC1Q8N766 993 aa11.22□□□□□ -0.61
CDH1-214ENST00000621016 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
CDH1-214ENST00000621016 NSRP1Q9H0G5 558 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms