RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 KBTBD12Q3ZCT8 623 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 LDHDQ86WU2 507 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 MAP7D3Q8IWC1 876 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 TRIML2Q8N7C3 387 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 TMEM143Q96AN5 459 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 MIPEPQ99797 713 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 MSTO1Q9BUK6 570 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 GPR88Q9GZN0 384 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 PARVAQ9NVD7 372 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CENPFP49454 3210 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 LYNP07948 512 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CYP3A4P08684 503 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
CDH5-208ENST00000614547 STX3Q13277 289 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
CDH5-208ENST00000614547 DENND5BQ6ZUT9 1274 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 SPATA18Q8TC71 538 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 PPWD1Q96BP3 646 aaKnown RBP12.32□□□□□ -0.44
CDH5-208ENST00000614547 HSD17B14Q9BPX1 270 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 VAV3Q9UKW4 847 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 LRRC42Q9Y546 428 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 FRMPD4Q14CM0 1322 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 ADGRA3Q8IWK6 1321 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CHD4Q14839 1912 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 C2CD2LO14523 706 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 PEX1O43933 1283 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 RTN3O95197 1032 aaPredicted RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 CYP1A2P05177 515 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 ANPEPP15144 967 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 NELFEP18615 380 aaKnown RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 SOX11P35716 441 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 RPL10AP62906 217 aaKnown RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 CNGA3Q16281 694 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 ANKRD22Q5VYY1 191 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 SWSAP1Q6NVH7 229 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 PCGF5Q86SE9 256 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 RCOR2Q8IZ40 523 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 RBM15BQ8NDT2 890 aaKnown RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 ZC3H7BQ9UGR2 993 aaKnown RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 GINS2Q9Y248 185 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 ZMYM2Q9UBW7 1377 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 KBTBD13C9JR72 458 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 STAMBPO95630 424 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 ZBED1O96006 694 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 CDH6P55285 790 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 RTP1P59025 263 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 Q4G0T1 1027 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 SPOCD1Q6ZMY3 1216 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 PTPRN2Q92932 1015 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 ACSS2Q9NR19 701 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 RBAKQ9NYW8 714 aaPredicted RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 KCNN4O15554 427 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 GPD1LQ8N335 351 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 OLFM3Q96PB7 478 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 ASCC2Q9H1I8 757 aaPredicted RBP12.31□□□□□ -0.44
CDH5-208ENST00000614547 WDR35Q9P2L0 1181 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 GRID1Q9ULK0 1009 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 TBX20Q9UMR3 447 aa12.31□□□□□ -0.44
CDH5-208ENST00000614547 GOLGA8QA0A0J9YX86 632 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 GOLGA8OA6NCC3 632 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 A6NHS1 94 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 E7ENQ6 273 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 GOLGA8NF8WBI6 632 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 K7ERI5 159 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 WFS1O76024 890 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 PROCP04070 461 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 T-ENOLP0DO92 83 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 ALADP13716 330 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
CDH5-208ENST00000614547 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 SHC3Q92529 594 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 PRKAG3Q9UGI9 489 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
CDH5-208ENST00000614547 LRP6O75581 1613 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
CDH5-208ENST00000614547 NPTXRO95502 500 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 C6orf222P0C671 652 aaPredicted RBP12.3□□□□□ -0.44
CDH5-208ENST00000614547 TMEM191BP0C7N4 346 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 FAM200BP0CF97 657 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 NPTX2P47972 431 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 BST1Q10588 318 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 BMT2Q1RMZ1 405 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 ZNF772Q68DY9 489 aaPredicted RBP12.3□□□□□ -0.44
CDH5-208ENST00000614547 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 ARHGAP18Q8N392 663 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 TMEM35BQ8NCS4 154 aa12.3□□□□□ -0.44
CDH5-208ENST00000614547 SRPK1Q96SB4 655 aaKnown RBP12.3□□□□□ -0.44
CDH5-208ENST00000614547 GRIP2Q9C0E4 1043 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms