RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TDRPQ86YL5 185 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 SYT2Q8N9I0 419 aaPredicted RBP23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 MAML1Q92585 1016 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 GPR20Q99678 358 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 HSD17B14Q9BPX1 270 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 ZWILCHQ9H900 591 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 HMX1Q9NP08 348 aaPredicted RBP23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 CYLDQ9NQC7 956 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 TAS2R14Q9NYV8 317 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 IL1RAPL1Q9NZN1 696 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 STX18Q9P2W9 335 aaKnown RBP23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 APEX2Q9UBZ4 518 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 ZFP69BQ9UJL9 534 aa23.08■■□□□ 1.29
POLR2J3-220ENST00000613744 CHKAP35790 457 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 TCF7P36402 384 aaPredicted RBP23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 PSMC6P62333 389 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 LAMC2Q13753 1193 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 KYNUQ16719 465 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 LXNQ9BS40 222 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 POLR3CQ9BUI4 534 aaPredicted RBP23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 SYNCQ9H7C4 482 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 WRAP73Q9P2S5 460 aaPredicted RBP23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 ASIC3Q9UHC3 531 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 MYADML2A6NDP7 307 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 WDR64B1ANS9 1081 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 RASA4BC9J798 803 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 EIF3DO15371 548 aaKnown RBP eCLIP23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 RASA4O43374 803 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 RARBP10826 455 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 IVDP26440 423 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 CASP4P49662 377 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 UGCGQ16739 394 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 KHDC1Q4VXA5 237 aaKnown RBP23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 SWSAP1Q6NVH7 229 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 ZNF449Q6P9G9 518 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 FAM186BQ8IYM0 893 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 PCDHA10Q9Y5I2 948 aa23.07■■□□□ 1.28
POLR2J3-220ENST00000613744 GAS8O95995 478 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 C6orf222P0C671 652 aaPredicted RBP23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 DAB2IPQ5VWQ8 1189 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 ABHD15Q6UXT9 468 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 KCTD17Q8N5Z5 321 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 INTS2Q9H0H0 1204 aaKnown RBP23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 PPCSQ9HAB8 311 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 ATXN10Q9UBB4 475 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 TMCO1Q9UM00 188 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 DNAH12Q6ZR08 3092 aa23.06■■□□□ 1.28
POLR2J3-220ENST00000613744 ZBTB39O15060 712 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 MAP3K7O43318 606 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 DUSP11O75319 330 aaKnown RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 IMPDH2P12268 514 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 DNAJC3Q13217 504 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 RCN1Q15293 331 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 TRABD2AQ86V40 505 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 CCDC60Q8IWA6 550 aaPredicted RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 SEPT1Q8WYJ6 367 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 BTBD10Q9BSF8 475 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 AP5M1Q9H0R1 490 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 TUFT1Q9NNX1 390 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 GABBR1Q9UBS5 961 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 PHF24Q9UPV7 400 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 DNM3Q9UQ16 869 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 A8MXQ7 604 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 FTLP02792 175 aaPredicted RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 GAP43P17677 238 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 KCNJ1P48048 391 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 JAK3P52333 1124 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 TAF1BQ53T94 588 aaPredicted RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 FYB2Q5VWT5 728 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 ZC3H18Q86VM9 953 aaKnown RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 RBM12BQ8IXT5 1001 aaKnown RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 PHC3Q8NDX5 983 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 PPTC7Q8NI37 304 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 REEP2Q9BRK0 252 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 XPNPEP3Q9NQH7 507 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 OLFML3Q9NRN5 406 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 SEPT11Q9NVA2 429 aaKnown RBP23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 ANAPC5Q9UJX4 755 aa23.05■■□□□ 1.28
POLR2J3-220ENST00000613744 TCRBV7S2A1N4TA0A589 114 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 TTC36A6NLP5 189 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 PSMG1O95456 288 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 CBX6O95503 412 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 PYGLP06737 847 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 SUPT20HL2P0C7V6 817 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 ATF2P15336 505 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 GSTT1P30711 240 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 SFNP31947 248 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 ITGA8P53708 1063 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 NLRP9Q7RTR0 991 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 PCDHB13Q9Y5F0 798 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 ZMYM2Q9UBW7 1377 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 P4HBP07237 508 aaKnown RBP23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 PSAPP07602 524 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 ZNF286BP0CG31 522 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 GZMAP12544 262 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 RANBP1P43487 201 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 MESDQ14696 234 aa23.04■■□□□ 1.28
POLR2J3-220ENST00000613744 CTC1Q2NKJ3 1217 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms