RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 SP9P0CG40 484 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 UCHL3P15374 230 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 TRIM21P19474 475 aaKnown RBP11.04□□□□□ -0.64
LINC01954-201ENST00000607419 ASPAP45381 313 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 BRCC3P46736 316 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
LINC01954-201ENST00000607419 YWHAEP62258 255 aaKnown RBP11.04□□□□□ -0.64
LINC01954-201ENST00000607419 TDGQ13569 410 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 CUL2Q13617 745 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 TRIM14Q14142 442 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 ARHGEF19Q8IW93 802 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 TTC39CQ8N584 583 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 APPL2Q8NEU8 664 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 ST13P5Q8NFI4 369 aaPredicted RBP11.04□□□□□ -0.64
LINC01954-201ENST00000607419 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 ELMO3Q96BJ8 720 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 TMEM169Q96HH4 297 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 NECTIN4Q96NY8 510 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 MMS19Q96T76 1030 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 BCO2Q9BYV7 579 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 GANQ9H2C0 597 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 CEP72Q9P209 647 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 STK39Q9UEW8 545 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 DNAJC12Q9UKB3 198 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 POLIQ9UNA4 740 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 USTQ9Y2C2 406 aa11.04□□□□□ -0.64
LINC01954-201ENST00000607419 TPRP12270 2363 aaKnown RBP11.04□□□□□ -0.64
LINC01954-201ENST00000607419 SF3B1O75533 1304 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01954-201ENST00000607419 RALGAPA1Q6GYQ0 2036 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 F8W810 466 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 SYN3O14994 580 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 TACC1O75410 805 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 EFEMP2O95967 443 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 CYP11A1P05108 521 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 CFHP08603 1231 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 TPM1P09493 284 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 SRGAP2BP0DMP2 458 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 ODC1P11926 461 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 TYMPP19971 482 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 IGFBP6P24592 240 aaPredicted RBP11.03□□□□□ -0.64
LINC01954-201ENST00000607419 POLR2FP61218 127 aaKnown RBP11.03□□□□□ -0.64
LINC01954-201ENST00000607419 APBA1Q02410 837 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 KRT17Q04695 432 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
LINC01954-201ENST00000607419 SOWAHAQ2M3V2 549 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 ATAT1Q5SQI0 421 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 IQCEQ6IPM2 695 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 GJB7Q6PEY0 223 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 RRAGAQ7L523 313 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 CACNA2D4Q7Z3S7 1137 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 TMC6Q7Z403 805 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 LIMS2Q7Z4I7 341 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 METTL23Q86XA0 190 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 DRC7Q8IY82 874 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 TMEM86AQ8N2M4 240 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
LINC01954-201ENST00000607419 KREMEN1Q96MU8 473 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 NAA15Q9BXJ9 866 aaKnown RBP11.03□□□□□ -0.64
LINC01954-201ENST00000607419 TTYH3Q9C0H2 523 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 PUF60Q9UHX1 559 aaKnown RBP11.03□□□□□ -0.64
LINC01954-201ENST00000607419 DSEQ9UL01 958 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 L1RE1Q9UN81 338 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 FHOD1Q9Y613 1164 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 ASPMQ8IZT6 3477 aa11.03□□□□□ -0.64
LINC01954-201ENST00000607419 GREB1Q4ZG55 1949 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 I3L4J1 428 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 EPHB6O15197 1021 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 FGFR3P22607 806 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 WARSP23381 471 aaKnown RBP11.02□□□□□ -0.65
LINC01954-201ENST00000607419 RAPGEF1Q13905 1077 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 FAM171A1Q5VUB5 890 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 SCARA5Q6ZMJ2 495 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.65
LINC01954-201ENST00000607419 DDX53Q86TM3 631 aaKnown RBP11.02□□□□□ -0.65
LINC01954-201ENST00000607419 FMNL3Q8IVF7 1028 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 RNF168Q8IYW5 571 aaPredicted RBP11.02□□□□□ -0.65
LINC01954-201ENST00000607419 PDCL2Q8N4E4 241 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 ZNF397Q8NF99 534 aaPredicted RBP11.02□□□□□ -0.65
LINC01954-201ENST00000607419 SHC3Q92529 594 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 VN1R3Q9BXE9 311 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 STK33Q9BYT3 514 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 DNAI2Q9GZS0 605 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 ZBP1Q9H171 429 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 SDCBP2Q9H190 292 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 NUCKS1Q9H1E3 243 aaKnown RBP11.02□□□□□ -0.65
LINC01954-201ENST00000607419 SEMA4AQ9H3S1 761 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 NLRC4Q9NPP4 1024 aa11.02□□□□□ -0.65
LINC01954-201ENST00000607419 CISHQ9NSE2 258 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms