RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ATL2Q8NHH9 583 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 TXLNGYQ9BZA5 131 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 PSTPIP1O43586 416 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 CILPO75339 1184 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 ADORA2BP29275 332 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 HOXA11P31270 313 aaPredicted RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 ARSEP51690 589 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 FASTKD3Q14CZ7 662 aaKnown RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 NPNTQ6UXI9 565 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 KATNAL2Q8IYT4 538 aa16.76■□□□□ 0.27
CTSA-214ENST00000606788 NGRNQ9NPE2 291 aaKnown RBP16.76■□□□□ 0.27
CTSA-214ENST00000606788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.76■□□□□ 0.27
CTSA-214ENST00000606788 CST8O60676 142 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 ATP2C2O75185 946 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 GCLCP48506 637 aaPredicted RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 YWHAEP62258 255 aaKnown RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 PPP1R26Q5T8A7 1209 aaPredicted RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 LRIG3Q6UXM1 1119 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 NDRG1Q92597 394 aaKnown RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 SNF8Q96H20 258 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 CWC15Q9P013 229 aaKnown RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 RRP15Q9Y3B9 282 aaKnown RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 SYNJ2BP-COX16A0A087WUM0 186 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 A0A1B0GUA9 196 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 SHOX2O60902 331 aaPredicted RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 IVDP26440 423 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 GDF10P55107 478 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 BYSLQ13895 437 aaKnown RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 GOLGA7BQ2TAP0 167 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 ZC3H18Q86VM9 953 aaKnown RBP16.75■□□□□ 0.27
CTSA-214ENST00000606788 XYLT1Q86Y38 959 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 C3orf20Q8ND61 904 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 EXD1Q8NHP7 514 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 VCPIP1Q96JH7 1222 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 CFAP57Q96MR6 1250 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 MAF1Q9H063 256 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 COX16Q9P0S2 106 aa16.75■□□□□ 0.27
CTSA-214ENST00000606788 F5H423 210 aaPredicted RBP16.74■□□□□ 0.27
CTSA-214ENST00000606788 RECQL4O94761 1208 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 PPP2R2AP63151 447 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 PAXIP1Q6ZW49 1069 aaPredicted RBP16.74■□□□□ 0.27
CTSA-214ENST00000606788 LINC01465Q8N7H1 131 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 CXorf38Q8TB03 319 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 CLEC4CQ8WTT0 213 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 KAT2BQ92831 832 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 NME7Q9Y5B8 376 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 MEIS3P2A8K0S8 358 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 EIF4BP23588 611 aaKnown RBP16.74■□□□□ 0.27
CTSA-214ENST00000606788 ATXN1P54253 815 aaKnown RBP16.74■□□□□ 0.27
CTSA-214ENST00000606788 ENPEPQ07075 957 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 ANKMY2Q8IV38 441 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 ANKRD42Q8N9B4 389 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 KCTD6Q8NC69 237 aa16.74■□□□□ 0.27
CTSA-214ENST00000606788 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 CCDC130P13994 396 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 MIPP30301 263 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 CLUL1Q15846 466 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 TRNP1Q6NT89 227 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 ANKRD23Q86SG2 305 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 RFX6Q8HWS3 928 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 ACTL9Q8TC94 416 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.73■□□□□ 0.273e-6■■■■■ 50.8
CTSA-214ENST00000606788 BCO2Q9BYV7 579 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 IVLP07476 585 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 TFE3P19532 575 aaPredicted RBP16.73■□□□□ 0.27
CTSA-214ENST00000606788 LMO2P25791 158 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 CETN2P41208 172 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 RBP5P82980 135 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 SKOR1P84550 965 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 OTUD4Q01804 1114 aaKnown RBP16.73■□□□□ 0.27
CTSA-214ENST00000606788 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 FAM47CQ5HY64 1035 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 PLXNA1Q9UIW2 1896 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 MYADML2A6NDP7 307 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 HGSO14964 777 aaPredicted RBP16.73■□□□□ 0.27
CTSA-214ENST00000606788 LSM8O95777 96 aaKnown RBP16.73■□□□□ 0.27
CTSA-214ENST00000606788 PDGFRAP16234 1089 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 ACAT1P24752 427 aaKnown RBP16.73■□□□□ 0.27
CTSA-214ENST00000606788 PTGISQ16647 500 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 QPCTQ16769 361 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 PMF1Q6P1K2 205 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 C1orf228Q6PIY5 440 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 FAM183BPQ6ZVS7 135 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 C12orf50Q8NA57 414 aaPredicted RBP16.73■□□□□ 0.27
CTSA-214ENST00000606788 RNF169Q8NCN4 708 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 ZIC5Q96T25 663 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 SAYSD1Q9NPB0 183 aa16.73■□□□□ 0.27
CTSA-214ENST00000606788 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.73■□□□□ 0.27
CTSA-214ENST00000606788 MED7O43513 233 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 LIASO43766 372 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 C6orf222P0C671 652 aaPredicted RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 CHN1P15882 459 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 GPD2P43304 727 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 DRG2P55039 364 aaKnown RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 EIF1ADQ8N9N8 165 aaKnown RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 RXFP2Q8WXD0 754 aa16.72■□□□□ 0.27
CTSA-214ENST00000606788 GCOM2Q9BZD3 368 aaPredicted RBP16.72■□□□□ 0.27
CTSA-214ENST00000606788 KCNK9Q9NPC2 374 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms