RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 MYO1EQ12965 1108 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 SRSF5Q13243 272 aaKnown RBP26.1■■□□□ 1.77
SNX5-219ENST00000606602 CCDC142Q17RM4 750 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 SOWAHAQ2M3V2 549 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 TRIM68Q6AZZ1 485 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 CC2D1AQ6P1N0 951 aaPredicted RBP26.1■■□□□ 1.77
SNX5-219ENST00000606602 SPATA2LQ8IUW3 424 aaPredicted RBP26.1■■□□□ 1.77
SNX5-219ENST00000606602 LINC00301Q8NCQ3 95 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 SPATA18Q8TC71 538 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 TNMDQ9H2S6 317 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 INTS13Q9NVM9 706 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 UXTQ9UBK9 157 aaPredicted RBP26.1■■□□□ 1.77
SNX5-219ENST00000606602 TCHHQ07283 1943 aa26.1■■□□□ 1.77
SNX5-219ENST00000606602 ZNF233A6NK53 670 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 GABRDO14764 452 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 NOL4O94818 638 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 TNNC2P02585 160 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 RETP07949 1114 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 CNR2P34972 360 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 CBWD2Q8IUF1 395 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 SCN4BQ8IWT1 228 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 OR5B17Q8NGF7 314 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 TRMT2BQ96GJ1 504 aaKnown RBP26.09■■□□□ 1.77
SNX5-219ENST00000606602 HPDLQ96IR7 371 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 TRPC7Q9HCX4 862 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 TFIP11Q9UBB9 837 aaKnown RBP26.09■■□□□ 1.77
SNX5-219ENST00000606602 CDV3Q9UKY7 258 aaKnown RBP26.09■■□□□ 1.77
SNX5-219ENST00000606602 PTPRJQ12913 1337 aa26.09■■□□□ 1.77
SNX5-219ENST00000606602 K7ELQ4 463 aaPredicted RBP26.08■■□□□ 1.77
SNX5-219ENST00000606602 SPTLC2O15270 562 aa26.08■■□□□ 1.77
SNX5-219ENST00000606602 ATXN1P54253 815 aaKnown RBP26.08■■□□□ 1.77
SNX5-219ENST00000606602 GRSF1Q12849 480 aaKnown RBP eCLIP26.08■■□□□ 1.77
SNX5-219ENST00000606602 SURF1Q15526 300 aa26.08■■□□□ 1.77
SNX5-219ENST00000606602 DUOXA2Q1HG44 320 aa26.08■■□□□ 1.77
SNX5-219ENST00000606602 CFAP221Q4G0U5 840 aa26.08■■□□□ 1.77
SNX5-219ENST00000606602 RIN3Q8TB24 985 aa26.08■■□□□ 1.77
SNX5-219ENST00000606602 KBTBD4Q9NVX7 518 aa26.08■■□□□ 1.77
SNX5-219ENST00000606602 OTOL1A6NHN0 477 aaPredicted RBP26.07■■□□□ 1.76
SNX5-219ENST00000606602 TADA3O75528 432 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 ARSAP15289 507 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 HOXC13P31276 330 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 ZNF268Q14587 947 aaPredicted RBP26.07■■□□□ 1.76
SNX5-219ENST00000606602 E2F4Q16254 413 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 TMEM196Q5HYL7 178 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 DPH6Q7L8W6 267 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.07■■□□□ 1.76
SNX5-219ENST00000606602 TTC16Q8NEE8 873 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 DHX58Q96C10 678 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 FUBP3Q96I24 572 aaKnown RBP eCLIP26.07■■□□□ 1.76
SNX5-219ENST00000606602 MYRFLQ96LU7 910 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 ZNF396Q96N95 335 aaPredicted RBP26.07■■□□□ 1.76
SNX5-219ENST00000606602 TRIM9Q9C026 710 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 CUEDC2Q9H467 287 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 HSPBP1Q9NZL4 362 aa26.07■■□□□ 1.76
SNX5-219ENST00000606602 ATP2C2O75185 946 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 HOXA6P31267 233 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 HOXD13P35453 343 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 ASIC1P78348 528 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 AMPD3Q01432 767 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 AMPD2Q01433 879 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 PDGFRLQ15198 375 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 FSTL4Q6MZW2 842 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 CEP68Q76N32 757 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 CYP2S1Q96SQ9 504 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 SYT15Q9BQS2 421 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 KIAA1586Q9HCI6 787 aa26.06■■□□□ 1.76
SNX5-219ENST00000606602 TRDMT1O14717 391 aaKnown RBP26.05■■□□□ 1.76
SNX5-219ENST00000606602 PPP6R2O75170 966 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 CKMP06732 381 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 PSMC1P62191 440 aaKnown RBP26.05■■□□□ 1.76
SNX5-219ENST00000606602 PKN3Q6P5Z2 889 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 FAM171BQ6P995 826 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 C4orf50Q6ZRC1 276 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 WDR5BQ86VZ2 330 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 KBTBD7Q8WVZ9 684 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 CHFRQ96EP1 664 aa26.05■■□□□ 1.76
SNX5-219ENST00000606602 TRAV19A0A0A6YYK7 116 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 EIF3DO15371 548 aaKnown RBP eCLIP26.04■■□□□ 1.76
SNX5-219ENST00000606602 LRP3O75074 770 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 USP17L7P0C7H9 530 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 LMO2P25791 158 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 MAGEA11P43364 429 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 FAM160A1Q05DH4 1040 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 MTF1Q14872 753 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 LIMS2Q7Z4I7 341 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 WDR49Q8IV35 697 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 FSIP1Q8NA03 581 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 IQUBQ8NA54 791 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 RDH13Q8NBN7 331 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 SLC22A12Q96S37 553 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 MMS19Q96T76 1030 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 MAGEC2Q9UBF1 373 aaPredicted RBP26.04■■□□□ 1.76
SNX5-219ENST00000606602 CDH9Q9ULB4 789 aa26.04■■□□□ 1.76
SNX5-219ENST00000606602 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.04■■□□□ 1.76
SNX5-219ENST00000606602 CUTAO60888 179 aa26.03■■□□□ 1.76
SNX5-219ENST00000606602 ATG13O75143 517 aa26.03■■□□□ 1.76
SNX5-219ENST00000606602 PDGFRBP09619 1106 aa26.03■■□□□ 1.76
SNX5-219ENST00000606602 FAM26FQ5R3K3 315 aa26.03■■□□□ 1.76
SNX5-219ENST00000606602 EPM2AIP1Q7L775 607 aaPredicted RBP26.03■■□□□ 1.76
SNX5-219ENST00000606602 CPA6Q8N4T0 437 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms