RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GOLGA7BQ2TAP0 167 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PPP1R26Q5T8A7 1209 aaPredicted RBP12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CNKSR3Q6P9H4 555 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DSTYKQ6XUX3 929 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ACOT1Q86TX2 421 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 XYLT1Q86Y38 959 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DBF4BQ8NFT6 615 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SLC35F5Q8WV83 523 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ANKRD7Q92527 254 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CPXM1Q96SM3 734 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ACBD6Q9BR61 282 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TMEM175Q9BSA9 504 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 UBXN6Q9BZV1 441 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 C11orf49Q9H6J7 331 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RNF19AQ9NV58 838 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PCDHB8Q9UN66 801 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NME7Q9Y5B8 376 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PCDHB7Q9Y5E2 793 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 XPO1O14980 1071 aaKnown RBP12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TRAPPC3O43617 180 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SRGAP2O75044 1071 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 POMCP01189 267 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CLTBP09497 229 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RWDD2BP57060 319 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TLE2Q04725 743 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DCUN1D2Q6PH85 259 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 POLNQ7Z5Q5 900 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RHOT1Q8IXI2 618 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ABI1Q8IZP0 508 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TMEM130Q8N3G9 435 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 C3orf58Q8NDZ4 430 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SPATA4Q8NEY3 305 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MAIP1Q8WWC4 291 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 KCTD13Q8WZ19 329 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 OXCT2Q9BYC2 517 aaPredicted RBP12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SYNCQ9H7C4 482 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TBC1D13Q9NVG8 400 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CYTH4Q9UIA0 394 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ALPK3Q96L96 1907 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PLXNA3P51805 1871 aa12.97□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PCNTO95613 3336 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MYO16Q9Y6X6 1858 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CASTOR2A6NHX0 329 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PDE2AO00408 941 aaPredicted RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DPYSL4O14531 572 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SYN3O14994 580 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ZNF185O15231 689 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 B3GAT3O94766 335 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 KRT3P12035 628 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DESP17661 470 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PTPN1P18031 435 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PSMC1P62191 440 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ELAVL2Q12926 359 aaKnown RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TIGD5Q53EQ6 642 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SEL1L2Q5TEA6 688 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 WSCD1Q658N2 575 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CD300LGQ6UXG3 332 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 OSTM1Q86WC4 334 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TTC30AQ86WT1 665 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 KATNAL2Q8IYT4 538 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SCML4Q8N228 414 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RNF169Q8NCN4 708 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CAPZA3Q96KX2 299 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RUNDC3BQ96NL0 473 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 FAM193BQ96PV7 902 aaPredicted RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SYT15Q9BQS2 421 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DUSP16Q9BY84 665 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GOLPH3Q9H4A6 298 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PNPLA8Q9NP80 782 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ASNSD1Q9NWL6 643 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 LRFN2Q9ULH4 789 aa12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PACSIN2Q9UNF0 486 aaPredicted RBP12.96□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DNAH12Q6ZR08 3092 aa12.96□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PTPRSQ13332 1948 aa12.96□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 GLI1P08151 1106 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 NPR3P17342 541 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 LMO2P25791 158 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 CXCR5P32302 372 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 PTPN7P35236 360 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 COPS2P61201 443 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ORC1Q13415 861 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ELF2Q15723 593 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 ERCC6LQ2NKX8 1250 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 DCAF12L1Q5VU92 463 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 WDR93Q6P2C0 686 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 FAM171BQ6P995 826 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 SLC26A9Q7LBE3 791 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
NEDD8-MDP1-203ENST00000604306 THEM5Q8N1Q8 247 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms