RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 KIF9Q9HAQ2 790 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 HSPBP1Q9NZL4 362 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 GMEB2Q9UKD1 530 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 RAB23Q9ULC3 237 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 CCL26Q9Y258 94 aa18.23■□□□□ 0.51
SCAF1-204ENST00000601038 K7ESF4 209 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 EIF3DO15371 548 aaKnown RBP eCLIP18.22■□□□□ 0.51
SCAF1-204ENST00000601038 CUTAO60888 179 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 TNNC2P02585 160 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 RUNX3Q13761 415 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 ZNF268Q14587 947 aaPredicted RBP18.22■□□□□ 0.51
SCAF1-204ENST00000601038 FAM171BQ6P995 826 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 EPM2AIP1Q7L775 607 aaPredicted RBP18.22■□□□□ 0.51
SCAF1-204ENST00000601038 SPATA2LQ8IUW3 424 aaPredicted RBP18.22■□□□□ 0.51
SCAF1-204ENST00000601038 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 OR5B17Q8NGF7 314 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 ZNF507Q8TCN5 953 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 DHX58Q96C10 678 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 PTPRJQ12913 1337 aa18.22■□□□□ 0.51
SCAF1-204ENST00000601038 HCRTO43612 131 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 PDIA4P13667 645 aaKnown RBP18.21■□□□□ 0.51
SCAF1-204ENST00000601038 SDHBP21912 280 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 TGM1P22735 817 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 HOXA6P31267 233 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 CNR2P34972 360 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 ASIC1P78348 528 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 RSPO4Q2I0M5 234 aaPredicted RBP18.21■□□□□ 0.51
SCAF1-204ENST00000601038 LAIR1Q6GTX8 287 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 CC2D1AQ6P1N0 951 aaPredicted RBP18.21■□□□□ 0.51
SCAF1-204ENST00000601038 SHC4Q6S5L8 630 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 WDR49Q8IV35 697 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 SNX21Q969T3 373 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 EBF3Q9H4W6 596 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 HPS4Q9NQG7 708 aa18.21■□□□□ 0.51
SCAF1-204ENST00000601038 ZNF638Q14966 1978 aaKnown RBP18.21■□□□□ 0.5
SCAF1-204ENST00000601038 PRR5-ARHGAP8B1AHC4 643 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 CHURC1-FNTBB4DL54 471 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 TGFB1I1O43294 461 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 HRO43593 1189 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 TADA3O75528 432 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 MAGEA11P43364 429 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 FNTBP49356 437 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 SNRPFP62306 86 aaKnown RBP18.2■□□□□ 0.5
SCAF1-204ENST00000601038 ARHGAP8P85298 464 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 AMPD2Q01433 879 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 LMNB2Q03252 620 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 DMWDQ09019 674 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 CCDC142Q17RM4 750 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 TMEM196Q5HYL7 178 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 FAM26FQ5R3K3 315 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 C4orf50Q6ZRC1 276 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 LONP2Q86WA8 852 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 KBTBD7Q8WVZ9 684 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 C2orf42Q9NWW7 574 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 CDH9Q9ULB4 789 aa18.2■□□□□ 0.5
SCAF1-204ENST00000601038 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
SCAF1-204ENST00000601038 OTOL1A6NHN0 477 aaPredicted RBP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 TRDMT1O14717 391 aaKnown RBP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 OBSL1O75147 1896 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 ATP2C2O75185 946 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 LMO2P25791 158 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 FAM160A1Q05DH4 1040 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 GRSF1Q12849 480 aaKnown RBP eCLIP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 SIM2Q14190 667 aaPredicted RBP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 PDGFRLQ15198 375 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 MAPRE1Q15691 268 aaKnown RBP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 SNRNP35Q16560 246 aaKnown RBP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 LPAL2Q16609 132 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 TRIM68Q6AZZ1 485 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 PRR23BQ6ZRT6 265 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 TRAPPC11Q7Z392 1133 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 SCN4BQ8IWT1 228 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 FSIP1Q8NA03 581 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 SYT15Q9BQS2 421 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 MAGEF1Q9HAY2 307 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 AGPAT3Q9NRZ7 376 aa18.19■□□□□ 0.5
SCAF1-204ENST00000601038 MAGEC2Q9UBF1 373 aaPredicted RBP18.19■□□□□ 0.5
SCAF1-204ENST00000601038 CEP250Q9BV73 2442 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 RETP07949 1114 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 USP17L7P0C7H9 530 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
SCAF1-204ENST00000601038 EHHADHQ08426 723 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 HEATR6Q6AI08 1181 aaKnown RBP18.18■□□□□ 0.5
SCAF1-204ENST00000601038 FSTL4Q6MZW2 842 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 VSTM1Q6UX27 236 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 UNC13DQ70J99 1090 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 RIN3Q8TB24 985 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 SCFD1Q8WVM8 642 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 CHFRQ96EP1 664 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 SPATA17Q96L03 361 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 CEP295NLQ96MC4 621 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 FNBP1Q96RU3 617 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 CYP2S1Q96SQ9 504 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 MMS19Q96T76 1030 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 CRTAC1Q9NQ79 661 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 USP18Q9UMW8 372 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 UBE4BO95155 1302 aa18.18■□□□□ 0.5
SCAF1-204ENST00000601038 TRAV19A0A0A6YYK7 116 aa18.17■□□□□ 0.5
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