RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 RCOR2Q8IZ40 523 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 ATL2Q8NHH9 583 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 APBA2Q99767 749 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 NT5C1AQ9BXI3 368 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 TRIM6Q9C030 488 aaPredicted RBP15.26■□□□□ 0.03
VRK3-217ENST00000599538 AP5M1Q9H0R1 490 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 PABPC3Q9H361 631 aaKnown RBP15.26■□□□□ 0.03
VRK3-217ENST00000599538 FAM49BQ9NUQ9 324 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 DNPEPQ9ULA0 475 aa15.26■□□□□ 0.03
VRK3-217ENST00000599538 C3orf70A6NLC5 250 aaPredicted RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 SHOX2O60902 331 aaPredicted RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 SLC10A3P09131 477 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 MYZAPP0CAP1 466 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 RGS7P49802 495 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 IRF5Q13568 498 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 PTK6Q13882 451 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 SLC29A2Q14542 456 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 LRRC38Q5VT99 294 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 RHBDF2Q6PJF5 856 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 CCDC25Q86WR0 208 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 ARRDC4Q8NCT1 418 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 MCRS1Q96EZ8 462 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 RABEP2Q9H5N1 569 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 DNAJC17Q9NVM6 304 aaKnown RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 CNTN3Q9P232 1028 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 BCCIPQ9P287 314 aaKnown RBP eCLIP15.25■□□□□ 0.03
VRK3-217ENST00000599538 GRIN2DO15399 1336 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 hCG_1818297A0A087WSY0 165 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 FAM155AB1AL88 458 aaPredicted RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 E5RJQ4 531 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 SPTLC1O15269 473 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 CD48P09326 243 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 CDKN2BP42772 138 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 GABRB2P47870 512 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 IRAK1P51617 712 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 HNRNPH2P55795 449 aaKnown RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 SOX4Q06945 474 aaPredicted RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 MYO1EQ12965 1108 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 ZNF268Q14587 947 aaPredicted RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 SOWAHAQ2M3V2 549 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 ZNF618Q5T7W0 954 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 C9orf57Q5W0N0 161 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 LCLAT1Q6UWP7 414 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 TTC30AQ86WT1 665 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 DPEP3Q9H4B8 488 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 SAE1Q9UBE0 346 aaPredicted RBP15.25■□□□□ 0.03
VRK3-217ENST00000599538 PCSK1NQ9UHG2 260 aa15.25■□□□□ 0.03
VRK3-217ENST00000599538 SMIM28A0A1B0GU29 152 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 C17orf102A2RUQ5 167 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 LIASO43766 372 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 GRAP2O75791 330 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 GABBR2O75899 941 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
VRK3-217ENST00000599538 ZSCAN5DPP0CG00 497 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 NR1D1P20393 614 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 IGFBP6P24592 240 aaPredicted RBP15.24■□□□□ 0.03
VRK3-217ENST00000599538 HPDP32754 393 aaPredicted RBP15.24■□□□□ 0.03
VRK3-217ENST00000599538 ITGA8P53708 1063 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
VRK3-217ENST00000599538 CDC42EP1Q00587 391 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 ZSCAN26Q16670 478 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 GOLGA7BQ2TAP0 167 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 KRT71Q3SY84 523 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 FAM102AQ5T9C2 384 aaPredicted RBP15.24■□□□□ 0.03
VRK3-217ENST00000599538 PMF1Q6P1K2 205 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 SESTD1Q86VW0 696 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 CAPS2Q9BXY5 557 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 MTRF1LQ9UGC7 380 aaKnown RBP15.24■□□□□ 0.03
VRK3-217ENST00000599538 PARP2Q9UGN5 583 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 DERAQ9Y315 318 aa15.24■□□□□ 0.03
VRK3-217ENST00000599538 HMGB1P1B2RPK0 211 aaPredicted RBP15.23■□□□□ 0.03
VRK3-217ENST00000599538 ETS1P14921 441 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 HOXC8P31273 242 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 CDR1P51861 262 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 GNGT1P63211 74 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 SKOR1P84550 965 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 CALCOCO2Q13137 446 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 TFDP3Q5H9I0 405 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 FAM183BPQ6ZVS7 135 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 BEST2Q8NFU1 509 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 FNIP1Q8TF40 1166 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 WNT8BQ93098 351 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 C10orf88Q9H8K7 445 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 ZFYVE28Q9HCC9 887 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 WHRNQ9P202 907 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 GABRQQ9UN88 632 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 PDCD11Q14690 1871 aaKnown RBP15.23■□□□□ 0.03
VRK3-217ENST00000599538 GOLGA6L10A6NI86 522 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 MEIS3P2A8K0S8 358 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 CAND2O75155 1236 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 GAS8O95995 478 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 PGK1P00558 417 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 FGFR1P11362 822 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 ADCY8P40145 1251 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 DYNLT1P63172 113 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 CAP1Q01518 475 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 GUCY1A3Q02108 690 aa15.23■□□□□ 0.03
VRK3-217ENST00000599538 C15orf59Q2T9L4 293 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms