RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 RARS2Q5T160 578 aaKnown RBP15.27■□□□□ 0.04
VRK3-213ENST00000597215 IQCEQ6IPM2 695 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 SYCE2Q6PIF2 218 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 TTC9BQ8N6N2 239 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 RBBP8NLQ8NC74 664 aaPredicted RBP15.27■□□□□ 0.04
VRK3-213ENST00000597215 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 SEPT5Q99719 369 aaPredicted RBP15.27■□□□□ 0.04
VRK3-213ENST00000597215 LPIN3Q9BQK8 851 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 GANQ9H2C0 597 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 CRISPLD1Q9H336 500 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 FAM207AQ9NSI2 230 aaPredicted RBP15.27■□□□□ 0.04
VRK3-213ENST00000597215 SLC27A5Q9Y2P5 690 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 FHOD1Q9Y613 1164 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 CCDC195A0A1B0GUA6 201 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 CBFA2T2O43439 604 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 XYLBO75191 536 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 PAPLNO95428 1278 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 POU2F2P09086 479 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 PAEPP09466 180 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 ALDH1A3P47895 512 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 CDR1P51861 262 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 TWF1Q12792 350 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 NR1I3Q14994 352 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 CES5AQ6NT32 575 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 VSTM1Q6UX27 236 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 TMC5Q6UXY8 1006 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 CYP26C1Q6V0L0 522 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 ELMOD1Q8N336 334 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 C12orf76Q8N812 135 aaPredicted RBP15.26■□□□□ 0.03
VRK3-213ENST00000597215 C12orf29Q8N999 325 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 SMRP1Q8NCR6 262 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 SHC3Q92529 594 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
VRK3-213ENST00000597215 MED10Q9BTT4 135 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 APOL5Q9BWW9 433 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 B3GNT5Q9BYG0 378 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 RHOBTB2Q9BYZ6 727 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 PRKD2Q9BZL6 878 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 FAM49BQ9NUQ9 324 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 IFNKQ9P0W0 207 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 THEGQ9P2T0 379 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 AJAP1Q9UKB5 411 aaPredicted RBP15.26■□□□□ 0.03
VRK3-213ENST00000597215 KIAA1257Q9ULG3 409 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 CNTN6Q9UQ52 1028 aa15.26■□□□□ 0.03
VRK3-213ENST00000597215 CLDN5O00501 218 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 CCL16O15467 120 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 NOL4O94818 638 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 VDRP11473 427 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 CCDC130P13994 396 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 CD19P15391 556 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 BDNFP23560 247 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 CYP2F1P24903 491 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 ZNF132P52740 706 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 EPHB3P54753 998 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 POLR2FP61218 127 aaKnown RBP15.25■□□□□ 0.03
VRK3-213ENST00000597215 RPL10AP62906 217 aaKnown RBP15.25■□□□□ 0.03
VRK3-213ENST00000597215 CLUL1Q15846 466 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 LEXMQ3ZCV2 418 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 SGO2Q562F6 1265 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 SMG7Q92540 1137 aaKnown RBP15.25■□□□□ 0.03
VRK3-213ENST00000597215 ZNF707Q96C28 371 aaPredicted RBP15.25■□□□□ 0.03
VRK3-213ENST00000597215 CYFIP2Q96F07 1278 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 SMARCD1Q96GM5 515 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 HNRNPABQ99729 332 aaKnown RBP15.25■□□□□ 0.03
VRK3-213ENST00000597215 NAA15Q9BXJ9 866 aaKnown RBP15.25■□□□□ 0.03
VRK3-213ENST00000597215 ZNF518BQ9C0D4 1074 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 ADAM7Q9H2U9 754 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 PRDM6Q9NQX0 595 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 MYH10P35580 1976 aa15.25■□□□□ 0.03
VRK3-213ENST00000597215 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 C2orf16Q68DN1 1984 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 TRIM66O15016 1216 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 EPHB6O15197 1021 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 SOAT2O75908 522 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 USP8P40818 1118 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 SMAD4Q13485 552 aaKnown RBP15.24■□□□□ 0.03
VRK3-213ENST00000597215 DRAP1Q14919 205 aaPredicted RBP15.24■□□□□ 0.03
VRK3-213ENST00000597215 VEPH1Q14D04 833 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 PPP1R26Q5T8A7 1209 aaPredicted RBP15.24■□□□□ 0.03
VRK3-213ENST00000597215 GPR149Q86SP6 731 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 SCN4BQ8IWT1 228 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 RIPOR3Q96MK2 946 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 STK33Q9BYT3 514 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
VRK3-213ENST00000597215 S1PR5Q9H228 398 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 PIDD1Q9HB75 910 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 ASB3Q9Y575 518 aa15.24■□□□□ 0.03
VRK3-213ENST00000597215 F8VZ95 297 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 RNF225M0QZC1 329 aaPredicted RBP15.23■□□□□ 0.03
VRK3-213ENST00000597215 AP1G2O75843 785 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 FAM200BP0CF97 657 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 ATF6P18850 670 aa15.23■□□□□ 0.03
VRK3-213ENST00000597215 ANXA13P27216 316 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms