RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HSFX1Q9UBD0 423 aa20.91■□□□□ 0.94
LSM4-203ENST00000593829 MAGEC2Q9UBF1 373 aaPredicted RBP20.91■□□□□ 0.94
LSM4-203ENST00000593829 CCL16O15467 120 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 POU2F2P09086 479 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 MTIF2P46199 727 aaKnown RBP20.9■□□□□ 0.94
LSM4-203ENST00000593829 RAP1GAPP47736 663 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 SPPL2BQ8TCT7 592 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 FAXDC2Q96IV6 333 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 BCO2Q9BYV7 579 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 SDCBP2Q9H190 292 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 CYP3A43Q9HB55 503 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 TMLHEQ9NVH6 421 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 PRKAG3Q9UGI9 489 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 GTF3C4Q9UKN8 822 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 NFE2L3Q9Y4A8 694 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.9■□□□□ 0.943e-6■■■□□ 18.4
LSM4-203ENST00000593829 CCDC66A2RUB6 948 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 A8MXQ7 604 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 PKMYT1Q99640 499 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 CRISPLD1Q9H336 500 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 SLC27A5Q9Y2P5 690 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 PCDHB5Q9Y5E4 795 aa20.9■□□□□ 0.94
LSM4-203ENST00000593829 MYBPHLA2RUH7 354 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 CBFA2T2O43439 604 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 CDR1P51861 262 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 PSMC1P62191 440 aaKnown RBP20.89■□□□□ 0.93
LSM4-203ENST00000593829 ETF1P62495 437 aaKnown RBP20.89■□□□□ 0.93
LSM4-203ENST00000593829 MAPRE1Q15691 268 aaKnown RBP20.89■□□□□ 0.93
LSM4-203ENST00000593829 FAM171BQ6P995 826 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 PHF7Q9BWX1 381 aaPredicted RBP20.89■□□□□ 0.93
LSM4-203ENST00000593829 POMKQ9H5K3 350 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 SAMSN1Q9NSI8 373 aaKnown RBP20.89■□□□□ 0.93
LSM4-203ENST00000593829 ZNF446Q9NWS9 450 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 ABI2Q9NYB9 513 aaPredicted RBP20.89■□□□□ 0.93
LSM4-203ENST00000593829 YIPF1Q9Y548 306 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 NME7Q9Y5B8 376 aa20.89■□□□□ 0.93
LSM4-203ENST00000593829 ATP2C2O75185 946 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 ALDH1A3P47895 512 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 TUFMP49411 452 aaKnown RBP20.88■□□□□ 0.93
LSM4-203ENST00000593829 TWF1Q12792 350 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 PLD1Q13393 1074 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 ADAMTS19Q8TE59 1207 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 MGAT5BQ3V5L5 792 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 HSP90AA4PQ58FG1 418 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 ADHFE1Q8IWW8 467 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 ELMOD1Q8N336 334 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 TTC9BQ8N6N2 239 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 TATDN2Q93075 761 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 SEPT5Q99719 369 aaPredicted RBP20.88■□□□□ 0.93
LSM4-203ENST00000593829 WDR6Q9NNW5 1121 aaKnown RBP20.88■□□□□ 0.93
LSM4-203ENST00000593829 ABCB6Q9NP58 842 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 CRTAC1Q9NQ79 661 aa20.88■□□□□ 0.93
LSM4-203ENST00000593829 KCNJ18B7U540 433 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 ATP8B1O43520 1251 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 PTPN1P18031 435 aaKnown RBP20.87■□□□□ 0.93
LSM4-203ENST00000593829 FANCCQ00597 558 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 MYL5Q02045 173 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 KCNJ12Q14500 433 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 SYT10Q6XYQ8 523 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 C4orf50Q6ZRC1 276 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 UNC93AQ86WB7 457 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 SPATA2LQ8IUW3 424 aaPredicted RBP20.87■□□□□ 0.93
LSM4-203ENST00000593829 MYCBPAPQ8TBZ2 947 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 TNIP3Q96KP6 325 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 DPEP3Q9H4B8 488 aa20.87■□□□□ 0.93
LSM4-203ENST00000593829 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.87■□□□□ 0.93
LSM4-203ENST00000593829 V9GYY5 206 aaPredicted RBP20.87■□□□□ 0.93
LSM4-203ENST00000593829 TPM1P09493 284 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 HAPLN1P10915 354 aaPredicted RBP20.86■□□□□ 0.93
LSM4-203ENST00000593829 NDST1P52848 882 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 EPHB3P54753 998 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 INCA1Q0VD86 236 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 MAN2A1Q16706 1144 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 CCDC142Q17RM4 750 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 GRASPQ7Z6J2 395 aaPredicted RBP20.86■□□□□ 0.93
LSM4-203ENST00000593829 B3GALNT2Q8NCR0 500 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 FUBP3Q96I24 572 aaKnown RBP eCLIP20.86■□□□□ 0.93
LSM4-203ENST00000593829 CLUHO75153 1309 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 TCF20Q9UGU0 1960 aaKnown RBP20.86■□□□□ 0.93
LSM4-203ENST00000593829 PTPN2P17706 415 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 EEF1GP26641 437 aaKnown RBP20.86■□□□□ 0.93
LSM4-203ENST00000593829 ZP2Q05996 745 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 CFAP221Q4G0U5 840 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 MDH1BQ5I0G3 518 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 TTC39CQ8N584 583 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 EHBP1Q8NDI1 1231 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 LMO3Q8TAP4 145 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 ZNF512Q96ME7 567 aaPredicted RBP20.86■□□□□ 0.93
LSM4-203ENST00000593829 TUBGCP2Q9BSJ2 902 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 FAM124BQ9H5Z6 455 aaPredicted RBP20.86■□□□□ 0.93
LSM4-203ENST00000593829 C5orf42Q9H799 3197 aa20.86■□□□□ 0.93
LSM4-203ENST00000593829 SOAT2O75908 522 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 CD58P19256 250 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 CYP27A1Q02318 531 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 TCP11X2Q5H9J9 407 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 IQCEQ6IPM2 695 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 MYLPFQ96A32 169 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 PCED1BQ96HM7 432 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 NT5C1BQ96P26 610 aa20.85■□□□□ 0.93
LSM4-203ENST00000593829 UHRF1Q96T88 793 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms