RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 AKAP13Q12802 2813 aa14.19□□□□□ -0.14
H3F3B-213ENST00000593254 PTPRDP23468 1912 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 A0A1W2PRU2 124 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 CHURC1-FNTBB4DL54 471 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 K7ESF4 209 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 TULP1O00294 542 aaPredicted RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 ARNTLO00327 626 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 ACTN4O43707 911 aaKnown RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 HUS1O60921 280 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 KRT19P08727 400 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 ATF6P18850 670 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 AFMP43652 599 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 FNTBP49356 437 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 RBP5P82980 135 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SRSF5Q13243 272 aaKnown RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 CUL4BQ13620 913 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SURF1Q15526 300 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 BMT2Q1RMZ1 405 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 MGAT5BQ3V5L5 792 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 LMBRD2Q68DH5 695 aaPredicted RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 VITQ6UXI7 678 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 GAREM2Q75VX8 874 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 TMEM86AQ8N2M4 240 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SPEM1Q8N4L4 309 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 OR5B17Q8NGF7 314 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 ZSCAN18Q8TBC5 510 aaPredicted RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SPATA18Q8TC71 538 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 ANKRD36BP1Q96IX9 119 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SEPT5Q99719 369 aaPredicted RBP14.18□□□□□ -0.14
H3F3B-213ENST00000593254 SLITRK6Q9H5Y7 841 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 PIAS3Q9Y6X2 628 aa14.18□□□□□ -0.14
H3F3B-213ENST00000593254 NCANO14594 1321 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 FGF19O95750 216 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 HAPLN1P10915 354 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 PSMC3P17980 439 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 VIPR2P41587 438 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 CDR1P51861 262 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 MLLT6P55198 1093 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 TSPY1Q01534 308 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 BFSP1Q12934 665 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 SNRNP35Q16560 246 aaKnown RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 STXBP5Q5T5C0 1151 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 HS2ST1Q7LGA3 356 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 LONP2Q86WA8 852 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 WDR49Q8IV35 697 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 NELFCDQ8IXH7 590 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 C12orf56Q8IXR9 622 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 GRAMD1CQ8IYS0 662 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 CEP57L1Q8IYX8 460 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 TOP6BLQ8N6T0 577 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 DEPDC1BQ8WUY9 529 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 LEO1Q8WVC0 666 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 LPIN3Q9BQK8 851 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 ACBD6Q9BR61 282 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 MKNK1Q9BUB5 465 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 SLC39A2Q9NP94 309 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 TMLHEQ9NVH6 421 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 DDX43Q9NXZ2 648 aaKnown RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 ABI2Q9NYB9 513 aaPredicted RBP14.17□□□□□ -0.14
H3F3B-213ENST00000593254 SERTAD1Q9UHV2 236 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 PCDHB5Q9Y5E4 795 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 SNX9Q9Y5X1 595 aa14.17□□□□□ -0.14
H3F3B-213ENST00000593254 KIF26AQ9ULI4 1882 aaPredicted RBP14.16□□□□□ -0.14
H3F3B-213ENST00000593254 GABRDO14764 452 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 CLIC2O15247 247 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 KLRC4O43908 158 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 TNNC2P02585 160 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 PFKFB1P16118 471 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 CMA1P23946 247 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 GABRR2P28476 465 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 GDI1P31150 447 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 KRT85P78386 507 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 MYO1EQ12965 1108 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 COL9A2Q14055 689 aaPredicted RBP14.16□□□□□ -0.14
H3F3B-213ENST00000593254 NFE2Q16621 373 aaPredicted RBP14.16□□□□□ -0.14
H3F3B-213ENST00000593254 DUOXA2Q1HG44 320 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 WDR44Q5JSH3 913 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 INTS6LQ5JSJ4 861 aaKnown RBP14.16□□□□□ -0.14
H3F3B-213ENST00000593254 IL31Q6EBC2 164 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 LIMS2Q7Z4I7 341 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 MFSD6LQ8IWD5 586 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 FAM160A2Q8N612 972 aaPredicted RBP14.16□□□□□ -0.14
H3F3B-213ENST00000593254 XXYLT1Q8NBI6 393 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 E2F7Q96AV8 911 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 SPATA32Q96LK8 384 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 PKMYT1Q99640 499 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 ATXN3LQ9H3M9 355 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 IL21Q9HBE4 155 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 CGNQ9P2M7 1197 aaKnown RBP14.16□□□□□ -0.14
H3F3B-213ENST00000593254 HPSEQ9Y251 543 aa14.16□□□□□ -0.14
H3F3B-213ENST00000593254 ANAPC1Q9H1A4 1944 aa14.15□□□□□ -0.14
H3F3B-213ENST00000593254 A0A1B0GVL5 298 aa14.15□□□□□ -0.14
H3F3B-213ENST00000593254 HEPACAM2A8MVW5 462 aa14.15□□□□□ -0.14
H3F3B-213ENST00000593254 PROS1P07225 676 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms