RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 NMD3Q96D46 503 aaKnown RBP16.53■□□□□ 0.24
MBD1-222ENST00000590208 DHRS4Q9BTZ2 278 aa16.53■□□□□ 0.24
MBD1-222ENST00000590208 ACSS3Q9H6R3 686 aa16.53■□□□□ 0.24
MBD1-222ENST00000590208 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
MBD1-222ENST00000590208 MEI4A8MW99 385 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 CIB2O75838 187 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 TM7SF2O76062 418 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 TGDSO95455 350 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 GTF2BQ00403 316 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 OASLQ15646 514 aaKnown RBP16.52■□□□□ 0.24
MBD1-222ENST00000590208 SFT2D3Q587I9 215 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 SYCP2LQ5T4T6 812 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 LPCAT4Q643R3 524 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 SPOPLQ6IQ16 392 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 RNF111Q6ZNA4 994 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 CDHR3Q6ZTQ4 885 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 NET1Q7Z628 596 aaPredicted RBP16.52■□□□□ 0.24
MBD1-222ENST00000590208 SATL1Q86VE3 508 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 ATP11CQ8NB49 1132 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 PPP2R3CQ969Q6 453 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 MTBPQ96DY7 904 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 CLIC5Q9NZA1 410 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
MBD1-222ENST00000590208 DYNLT1P63172 113 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 JAG1P78504 1218 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 CCDC174Q6PII3 467 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 RASSF3Q86WH2 238 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 PALM2Q8IXS6 379 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 NAT14Q8WUY8 206 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 TEKT3Q9BXF9 490 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 TBC1D30Q9Y2I9 924 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 SLC4A7Q9Y6M7 1214 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 COMMD3-BMI1R4GMX3 469 aa16.52■□□□□ 0.24
MBD1-222ENST00000590208 hCG_2014768A0A024R1R8 64 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 USP46P62068 366 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 FAAP100Q0VG06 881 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 MYBPC3Q14896 1274 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 TRMT5Q32P41 509 aaKnown RBP16.52■□□□□ 0.23
MBD1-222ENST00000590208 CES4AQ5XG92 561 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 APOBEC3HQ6NTF7 200 aaKnown RBP16.52■□□□□ 0.23
MBD1-222ENST00000590208 PRPF39Q86UA1 669 aaKnown RBP16.52■□□□□ 0.23
MBD1-222ENST00000590208 ARID3BQ8IVW6 561 aaPredicted RBP16.52■□□□□ 0.23
MBD1-222ENST00000590208 ST13P4Q8IZP2 240 aaPredicted RBP16.52■□□□□ 0.23
MBD1-222ENST00000590208 SMC1BQ8NDV3 1235 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 CPT1BQ92523 772 aa16.52■□□□□ 0.23
MBD1-222ENST00000590208 ZBTB12Q9Y330 459 aaPredicted RBP16.52■□□□□ 0.23
MBD1-222ENST00000590208 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 CCDC195A0A1B0GUA6 201 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 STK10O94804 968 aaKnown RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 PHBP35232 272 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 RARRES1P49788 294 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 NRLP54845 237 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 ALDH18A1P54886 795 aaKnown RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 IGDCC3Q8IVU1 814 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 HIC2Q96JB3 615 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 DNAJC1Q96KC8 554 aaKnown RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 WDR11Q9BZH6 1224 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 PPCSQ9HAB8 311 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 CHMP2BQ9UQN3 213 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 PCDHB2Q9Y5E7 798 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 F8VP50 259 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 SORBS2O94875 1100 aaKnown RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 PTK7Q13308 1070 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 C6orf163Q5TEZ5 329 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 LIN9Q5TKA1 542 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 B3GNT9Q6UX72 402 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 OR6Y1Q8NGX8 325 aa16.51■□□□□ 0.23
MBD1-222ENST00000590208 CHCHD3Q9NX63 227 aaKnown RBP16.51■□□□□ 0.23
MBD1-222ENST00000590208 MYH9P35579 1960 aaKnown RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 RBBP6Q7Z6E9 1792 aaKnown RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 PRR5-ARHGAP8B1AHC4 643 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 ZNF862O60290 1169 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 FAM155BO75949 473 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 ARHGAP8P85298 464 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 TTLL12Q14166 644 aaPredicted RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 SPOCD1Q6ZMY3 1216 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 MIER3Q7Z3K6 550 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 CHSY1Q86X52 802 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 RCOR2Q8IZ40 523 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 ALKBH8Q96BT7 664 aaKnown RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 CNTN3Q9P232 1028 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 BRWD3Q6RI45 1802 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 SPECC1L-ADORA2AF8WAN1 911 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 HNRNPRO43390 633 aaKnown RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 TMEM63AO94886 807 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 PGM3O95394 542 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 PABPC4LP0CB38 370 aaKnown RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 VAV1P15498 845 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 PDE1BQ01064 536 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 DEUP1Q05D60 604 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 DLG1Q12959 904 aa16.5■□□□□ 0.23
MBD1-222ENST00000590208 UBAP2LQ14157 1087 aaKnown RBP16.5■□□□□ 0.23
MBD1-222ENST00000590208 KLHL38Q2WGJ6 581 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms