RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 B3GNT5Q9BYG0 378 aa20.18■□□□□ 0.82
CLPTM1-209ENST00000588855 XPO4Q9C0E2 1151 aaKnown RBP20.18■□□□□ 0.82
CLPTM1-209ENST00000588855 SFXN1Q9H9B4 322 aa20.18■□□□□ 0.82
CLPTM1-209ENST00000588855 MAFFQ9ULX9 164 aa20.18■□□□□ 0.82
CLPTM1-209ENST00000588855 YIPF1Q9Y548 306 aa20.18■□□□□ 0.82
CLPTM1-209ENST00000588855 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 H3BQ06 376 aaPredicted RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CLDN5O00501 218 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 PNMA6AP0CW24 399 aaPredicted RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 KRT5P13647 590 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CCDC130P13994 396 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 KCNA5P22460 613 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CYP2F1P24903 491 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 ZNF132P52740 706 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CLUL1Q15846 466 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 MGAT5BQ3V5L5 792 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CFAP221Q4G0U5 840 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 PPM1LQ5SGD2 360 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 HLA-CQ95604 372 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 FUBP3Q96I24 572 aaKnown RBP eCLIP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 SEPT5Q99719 369 aaPredicted RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 ZNF518BQ9C0D4 1074 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 GPR88Q9GZN0 384 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CNTN6Q9UQ52 1028 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 DOCK6Q96HP0 2047 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 A0A1W2PQC6 194 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CALCAP01258 141 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 HAPLN1P10915 354 aaPredicted RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 TRIM21P19474 475 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 BDNFP23560 247 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 POLR2FP61218 127 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 RARS2Q5T160 578 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 TMC5Q6UXY8 1006 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 PAQR9Q6ZVX9 377 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 FAM35AQ86V20 835 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 FUKQ8N0W3 1084 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 SLC2A14Q8TDB8 520 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 HEXIM2Q96MH2 286 aaKnown RBP20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 MED10Q9BTT4 135 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 ABCB6Q9NP58 842 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 NLRC4Q9NPP4 1024 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 ZDHHC7Q9NXF8 308 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 HSFX1Q9UBD0 423 aa20.17■□□□□ 0.82
CLPTM1-209ENST00000588855 CCL16O15467 120 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 AP5Z1O43299 807 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 PBX1P40424 430 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 USP8P40818 1118 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 GPR15P49685 360 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 PLCB2Q00722 1185 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 TWF1Q12792 350 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 DRAP1Q14919 205 aaPredicted RBP20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 ZNF707Q96C28 371 aaPredicted RBP20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 DNAI2Q9GZS0 605 aa20.16■□□□□ 0.82
CLPTM1-209ENST00000588855 CCDC195A0A1B0GUA6 201 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 FOXN3O00409 490 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 LRG1P02750 347 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 PAEPP09466 180 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 CD19P15391 556 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 HOXB8P17481 243 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 ATF6P18850 670 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 ADORA2BP29275 332 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 HOXA9P31269 272 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 CACNA2D1P54289 1103 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 PPP1R26Q5T8A7 1209 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 CMASQ8NFW8 434 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 CYFIP2Q96F07 1278 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 TMEM30AQ9NV96 361 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 CD207Q9UJ71 328 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 CDH22Q9UJ99 828 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 COG5Q9UP83 839 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 GREB1Q4ZG55 1949 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 PATJQ8NI35 1801 aa20.15■□□□□ 0.82
CLPTM1-209ENST00000588855 F8VZ95 297 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 CBFA2T2O43439 604 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 HNRNPA1P09651 372 aaKnown RBP eCLIP20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 MAGEA11P43364 429 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 TUFMP49411 452 aaKnown RBP20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 SARM1Q6SZW1 724 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 RTL10Q7L3V2 364 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 SMRP1Q8NCR6 262 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 HNRNPABQ99729 332 aaKnown RBP20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 STK33Q9BYT3 514 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 PRKD2Q9BZL6 878 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 S1PR5Q9H228 398 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 ACP6Q9NPH0 428 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 KRT82Q9NSB4 513 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 DAAM1Q9Y4D1 1078 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 ATP8B3O60423 1300 aa20.14■□□□□ 0.81
CLPTM1-209ENST00000588855 PAPLNO95428 1278 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 TPM3P06753 285 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 VDRP11473 427 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 BRD2P25440 801 aaKnown RBP20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 ALDH1A3P47895 512 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 JAM2P57087 298 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 DDR2Q16832 855 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 SGO2Q562F6 1265 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 SDHAF4Q5VUM1 108 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 SCN4BQ8IWT1 228 aa20.13■□□□□ 0.81
CLPTM1-209ENST00000588855 STKLD1Q8NE28 680 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms