RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 HIF1AQ16665 826 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 DCAF4L1Q3SXM0 396 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RGS9BPQ6ZS82 235 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 SPATA21Q7Z572 469 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 CCDC91Q7Z6B0 441 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 CPNE8Q86YQ8 564 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 ANKRD42Q8N9B4 389 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 KCTD6Q8NC69 237 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TRPM4Q8TD43 1214 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TMEM176AQ96HP8 235 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TGS1Q96RS0 853 aaKnown RBP7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TSPAN18Q96SJ8 248 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TUBB6Q9BUF5 446 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 VPS37BQ9H9H4 285 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 SLC40A1Q9NP59 571 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 VTA1Q9NP79 307 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 TXLNGQ9NUQ3 528 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 BTBD7Q9P203 1132 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 DNPEPQ9ULA0 475 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 NAALADL1Q9UQQ1 740 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 DERAQ9Y315 318 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 IVNS1ABPQ9Y6Y0 642 aa7.53□□□□□ -1.2
SPIDR-228ENST00000588781 FAM170AA1A519 330 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 SPDYE5A6NIY4 337 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 UNCXA6NJT0 531 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ZNF487B1APH4 448 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 GOLGA8SH3BPF8 625 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 APOC4-APOC2K7ER74 178 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 RASSF9O75901 435 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 DCTN3O75935 186 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 GJB6O95452 261 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 CST3P01034 146 aaPredicted RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 GH1P01241 217 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 APOC2P02655 101 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 KRT19P08727 400 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 GSTA2P09210 222 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TXNP10599 105 aaKnown RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 EZRP15311 586 aaKnown RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ZFXP17010 805 aaPredicted RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 KRT15P19012 456 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 KDELR1P24390 212 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TNFSF9P41273 254 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ASPAP45381 313 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 GABRB2P47870 512 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 RASSF2P50749 326 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 WNT7BP56706 349 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 GEMIN4P57678 1058 aaKnown RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 RIPK1Q13546 671 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PDK2Q15119 407 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TAZQ16635 292 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 LY6KQ17RY6 165 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 SPDYAQ5MJ70 313 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ZBTB41Q5SVQ8 909 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TREML2Q5T2D2 321 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 RNASEH2BQ5TBB1 312 aaKnown RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 LGSNQ5TDP6 509 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 HHATQ5VTY9 493 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 FYB2Q5VWT5 728 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 NUGGCQ68CJ6 796 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 CYP4F22Q6NT55 531 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 DPY19L2Q6NUT2 758 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 EFCAB12Q6NXP0 572 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 VSTM1Q6UX27 236 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PHLDB2Q86SQ0 1253 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TRABD2AQ86V40 505 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 RFX6Q8HWS3 928 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ZDHHC17Q8IUH5 632 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TRIM42Q8IWZ5 723 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PARP9Q8IXQ6 854 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PALM2Q8IXS6 379 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 SRRM1Q8IYB3 904 aaKnown RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PDIK1LQ8N165 341 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 SLC35B2Q8TB61 432 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ZNF398Q8TD17 642 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 MGARPQ8TDB4 240 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 LRRC8CQ8TDW0 803 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PYROXD1Q8WU10 500 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 USP6NLQ92738 828 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 MCRS1Q96EZ8 462 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 NLRP4Q96MN2 994 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TBCBQ99426 244 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 FERMT1Q9BQL6 677 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 CNPY3Q9BT09 278 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 OSBPL7Q9BZF2 842 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 ASCC2Q9H1I8 757 aaPredicted RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 CDT1Q9H211 546 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 TRABDQ9H4I3 376 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 RXFP1Q9HBX9 757 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 PTPRHQ9HD43 1115 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 NXF1Q9UBU9 619 aaKnown RBP7.52□□□□□ -1.21
SPIDR-228ENST00000588781 SLC12A4Q9UP95 1085 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 KCNH4Q9UQ05 1017 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 STARD13Q9Y3M8 1113 aa7.52□□□□□ -1.21
SPIDR-228ENST00000588781 C2CD2Q9Y426 696 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms