RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PCED1BQ96HM7 432 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 TWNKQ96RR1 684 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 SEPT5Q99719 369 aaPredicted RBP15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 NLRC4Q9NPP4 1024 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 FAM49BQ9NUQ9 324 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 TMLHEQ9NVH6 421 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 CNTN6Q9UQ52 1028 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 NME7Q9Y5B8 376 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 INSL5Q9Y5Q6 135 aa15.5■□□□□ 0.07
SCAMP4-209ENST00000585335 ITIH6Q6UXX5 1313 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 PLXNA3P51805 1871 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 F8VZ95 297 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 TRIM66O15016 1216 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 LINC01565O15544 149 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 MED7O43513 233 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 ZMYND10O75800 440 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 NOL4O94818 638 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 CCDC172P0C7W6 258 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 HOXA9P31269 272 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 STAT1P42224 750 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 EPHB3P54753 998 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 PTK2Q05397 1052 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 KCNC3Q14003 757 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 TRIM14Q14142 442 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 COL19A1Q14993 1142 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 CTC1Q2NKJ3 1217 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 DPY19L2P1Q6NXN4 242 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 ANKRD54Q6NXT1 300 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 FAM35AQ86V20 835 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 ZNF397Q8NF99 534 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 VN1R2Q8NFZ6 395 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 SLC2A14Q8TDB8 520 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 HLA-CQ95604 372 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 CYFIP2Q96F07 1278 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 NAA15Q9BXJ9 866 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 B3GNT5Q9BYG0 378 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 EDEM3Q9BZQ6 932 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 HESX1Q9UBX0 185 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 COG5Q9UP83 839 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 YIPF1Q9Y548 306 aa15.49■□□□□ 0.07
SCAMP4-209ENST00000585335 FOXN3O00409 490 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 SEC24AO95486 1093 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 GLP2RO95838 553 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 FAM200BP0CF97 657 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 CCDC130P13994 396 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 BDNFP23560 247 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 ADORA2BP29275 332 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 GRIK1P39086 918 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 ZNF132P52740 706 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 TAF12Q16514 161 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 ARHGAP17Q68EM7 881 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 SPECC1LQ69YQ0 1117 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 CES5AQ6NT32 575 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 CYP26C1Q6V0L0 522 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 ITIH5Q86UX2 942 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 SCN4BQ8IWT1 228 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 FAM71AQ8IYT1 594 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 C12orf29Q8N999 325 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 HNRNPABQ99729 332 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 UBE2ZQ9H832 354 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 PIDD1Q9HB75 910 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 KRT82Q9NSB4 513 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 AJAP1Q9UKB5 411 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 MYO6Q9UM54 1294 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 SLC27A5Q9Y2P5 690 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 ASB3Q9Y575 518 aa15.48■□□□□ 0.07
SCAMP4-209ENST00000585335 CCDC195A0A1B0GUA6 201 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 EPHB6O15197 1021 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 THAP12O43422 761 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 TBX10O75333 385 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 AP1G2O75843 785 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 POU2F2P09086 479 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 CYP2F1P24903 491 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 GNA15P30679 374 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 SOX5P35711 763 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 PBX1P40424 430 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 RBM10P98175 930 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 ITIH3Q06033 890 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 TWF1Q12792 350 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 CCDC142Q17RM4 750 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 RARS2Q5T160 578 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 FUKQ8N0W3 1084 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 CEP295NLQ96MC4 621 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 PRKD2Q9BZL6 878 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 ZNF518BQ9C0D4 1074 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 NUCKS1Q9H1E3 243 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 DMAP1Q9NPF5 467 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 EHD2Q9NZN4 543 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 CD207Q9UJ71 328 aa15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 MTCL1Q9Y4B5 1905 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-209ENST00000585335 A0A1W2PQJ5 194 aa15.46■□□□□ 0.07
SCAMP4-209ENST00000585335 GOLGA6L3A6NEY3 463 aa15.46■□□□□ 0.07
SCAMP4-209ENST00000585335 RNF225M0QZC1 329 aaPredicted RBP15.46■□□□□ 0.07
SCAMP4-209ENST00000585335 CLDN5O00501 218 aa15.46■□□□□ 0.07
SCAMP4-209ENST00000585335 CCL16O15467 120 aa15.46■□□□□ 0.07
SCAMP4-209ENST00000585335 CYP26A1O43174 497 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms