RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 SMARCB1Q12824 385 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 CUL2Q13617 745 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 SCARA5Q6ZMJ2 495 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 RNF19BQ6ZMZ0 732 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 TRIM67Q6ZTA4 783 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 RRAGAQ7L523 313 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 NEK11Q8NG66 645 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 FAM81BQ96LP2 452 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 ACBD6Q9BR61 282 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 SDCBP2Q9H190 292 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 GANQ9H2C0 597 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 POMKQ9H5K3 350 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 SMYD3Q9H7B4 428 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 CDH22Q9UJ99 828 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 ZNF318Q5VUA4 2279 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 MUC6Q6W4X9 2439 aa17.04■□□□□ 0.32
CSNK1D-223ENST00000584472 EPHB6O15197 1021 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 TACC1O75410 805 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 ADCY5O95622 1261 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 UCHL3P15374 230 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 RFX1P22670 979 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 RAP1GAPP47736 663 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 CDH8P55286 799 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 TSPY1Q01534 308 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 SIGLEC14Q08ET2 396 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 IQCEQ6IPM2 695 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 C2orf15Q8WU43 125 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 KBTBD7Q8WVZ9 684 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 KAT5Q92993 513 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 KREMEN1Q96MU8 473 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 ARID3AQ99856 593 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 NAA15Q9BXJ9 866 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 CYP3A43Q9HB55 503 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 PIDD1Q9HB75 910 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 CYP4F11Q9HBI6 524 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 DDX43Q9NXZ2 648 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 DNAJC12Q9UKB3 198 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 AJAP1Q9UKB5 411 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 INSL5Q9Y5Q6 135 aa17.03■□□□□ 0.32
CSNK1D-223ENST00000584472 CLUHO75153 1309 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 MTMR11A4FU01 709 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 SEC24AO95486 1093 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 VNN2O95498 520 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 OR4Q2P0C623 313 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 WARSP23381 471 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 FIGNQ5HY92 759 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 HFE2Q6ZVN8 426 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 UBALD2Q8IYN6 164 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 TMEM209Q96SK2 561 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 MRPL45Q9BRJ2 306 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 TTYH3Q9C0H2 523 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 DAAM1Q9Y4D1 1078 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 FHOD1Q9Y613 1164 aa17.02■□□□□ 0.32
CSNK1D-223ENST00000584472 CCL16O15467 120 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 LRG1P02750 347 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 MFAP3P55082 362 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 POLR2FP61218 127 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 PLD1Q13393 1074 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 NFE2Q16621 373 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 SLC39A12Q504Y0 691 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 OSTM1Q86WC4 334 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 UBR7Q8N806 425 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 FEZF2Q8TBJ5 459 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 PGLYRP2Q96PD5 576 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 PRRX2Q99811 253 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 NUP58Q9BVL2 599 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 FAM124BQ9H5Z6 455 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 CEP72Q9P209 647 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 RAPGEFL1Q9UHV5 662 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 SORCS3Q9UPU3 1222 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 PIEZO1Q92508 2521 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
CSNK1D-223ENST00000584472 TMEM221A6NGB7 291 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 M0R296 226 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 CD58P19256 250 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 ACO1P21399 889 aaKnown RBP17■□□□□ 0.31
CSNK1D-223ENST00000584472 INCA1Q0VD86 236 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 DUSP4Q13115 394 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 MTMR3Q13615 1198 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 ARHGAP44Q17R89 818 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 INTS6LQ5JSJ4 861 aaKnown RBP17■□□□□ 0.31
CSNK1D-223ENST00000584472 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 LRRTM3Q86VH5 581 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 TTC39CQ8N584 583 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 TDRD5Q8NAT2 981 aaKnown RBP17■□□□□ 0.31
CSNK1D-223ENST00000584472 ATAD1Q8NBU5 361 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms