RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ZNF423Q2M1K9 1284 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 LPCAT2Q7L5N7 544 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 TAS1R3Q7RTX0 852 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 TTC30AQ86WT1 665 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 SYT12Q8IV01 421 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 MRPS31Q92665 395 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 CNOT6LQ96LI5 555 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 TM6SF1Q9BZW5 370 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 DUS2Q9NX74 493 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 ARHGAP28Q9P2N2 729 aa8.25□□□□□ -1.09
CCDC47-205ENST00000582331 UBQLN1Q9UMX0 589 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 SETXQ7Z333 2677 aaKnown RBP8.25□□□□□ -1.09
CCDC47-205ENST00000582331 CITO14578 2027 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 TTC26A0AVF1 554 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CLDN3O15551 220 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 PFKFB2O60825 505 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 REC8O95072 547 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CTDNEP1O95476 244 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CLTAP09496 248 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CXCL8P10145 99 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 HAPLN1P10915 354 aaPredicted RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 PAX3P23760 479 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 NMT1P30419 496 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CCT6AP40227 531 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 MATR3P43243 847 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 IFNAR2P48551 515 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CDR1P51861 262 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 LILRA4P59901 499 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 STRN3Q13033 797 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 HNRNPDQ14103 355 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 ZNF268Q14587 947 aaPredicted RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 MTF1Q14872 753 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 NOLC1Q14978 699 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 SLC39A12Q504Y0 691 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 C2orf27AQ580R0 203 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 HAUS3Q68CZ6 603 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 LMBRD2Q68DH5 695 aaPredicted RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 TXNDC8Q6A555 127 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 SLC23A3Q6PIS1 610 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 ARMCX6Q7L4S7 300 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 TMEM150AQ86TG1 271 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 METTL3Q86U44 580 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 MON1AQ86VX9 555 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 DIS3L2Q8IYB7 885 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 TMEFF1Q8IYR6 380 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CCDC33Q8N5R6 958 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 MDGA1Q8NFP4 955 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 OR10T2Q8NGX3 314 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 RIN3Q8TB24 985 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 USP33Q8TEY7 942 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 C2orf15Q8WU43 125 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 OSCP1Q8WVF1 389 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 ATP2A3Q93084 1043 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 SPACA7Q96KW9 195 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 SENP8Q96LD8 212 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 TMUB1Q9BVT8 246 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 GTPBP2Q9BX10 602 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 ZCWPW1Q9H0M4 648 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 CCDC86Q9H6F5 360 aaKnown RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 TMEM74BQ9NUR3 256 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 MBD1Q9UIS9 605 aaPredicted RBP8.24□□□□□ -1.09
CCDC47-205ENST00000582331 SLC6A14Q9UN76 642 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 KIAA1024Q9UPX6 916 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 ABCA7Q8IZY2 2146 aa8.24□□□□□ -1.09
CCDC47-205ENST00000582331 LACTBL1A8MY62 500 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 K7EQS6 105 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 SLC16A4O15374 487 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 OPHN1O60890 802 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 HIP1RO75146 1068 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 CYP11A1P05108 521 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 CFIP05156 583 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 OR52Z1P0C646 297 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 FDPSP14324 419 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 HMGA1P17096 107 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 P2RY2P41231 377 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 PTGER3P43115 390 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 GUCY2FP51841 1108 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 SEC13P55735 322 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 FAM193AP78312 1265 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 FAM160A1Q05DH4 1040 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 PPP2R3AQ06190 1150 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 GFPT1Q06210 699 aaPredicted RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 MCL1Q07820 350 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 SMARCB1Q12824 385 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 BYSLQ13895 437 aaKnown RBP8.23□□□□□ -1.09
CCDC47-205ENST00000582331 TRIM29Q14134 588 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 CRY1Q16526 586 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 ECM1Q16610 540 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 DUOXA1Q1HG43 343 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 SPDYCQ5MJ68 293 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 LYSMD4Q5XG99 296 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 ZPBP2Q6X784 338 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 METTL23Q86XA0 190 aa8.23□□□□□ -1.09
CCDC47-205ENST00000582331 DAW1Q8N136 415 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms