RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 HPSEQ9Y251 543 aa23.94■■□□□ 1.42
CASC3-207ENST00000581849 TACC1O75410 805 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 PRAMEF12O95522 483 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 PFKFB1P16118 471 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 RALGPS2Q86X27 583 aaPredicted RBP23.93■■□□□ 1.42
CASC3-207ENST00000581849 RDH13Q8NBN7 331 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 MRPS31Q92665 395 aaKnown RBP23.93■■□□□ 1.42
CASC3-207ENST00000581849 NELL1Q92832 810 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 SPATA32Q96LK8 384 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 LRRC3BQ96PB8 259 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 SYT15Q9BQS2 421 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 FAM126AQ9BYI3 521 aaPredicted RBP23.93■■□□□ 1.42
CASC3-207ENST00000581849 EXOC1Q9NV70 894 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 THG1LQ9NWX6 298 aaKnown RBP23.93■■□□□ 1.42
CASC3-207ENST00000581849 NDRG2Q9UN36 371 aaKnown RBP23.93■■□□□ 1.42
CASC3-207ENST00000581849 ATP6V1DQ9Y5K8 247 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 R4GN57 208 aa23.93■■□□□ 1.42
CASC3-207ENST00000581849 GVINP1Q7Z2Y8 2422 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 FAM237AA0A1B0GTK4 181 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 MYBPHLA2RUH7 354 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 CYP2F1P24903 491 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 AVPR1AP37288 418 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 AP3M2P53677 418 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 VSTM1Q6UX27 236 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 MON1AQ86VX9 555 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 SLC9A9Q8IVB4 645 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 CCDC127Q96BQ5 260 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 ZDHHC9Q9Y397 364 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 PCDHGA2Q9Y5H1 932 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 GTF3C3Q9Y5Q9 886 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 DMDP11532 3685 aa23.92■■□□□ 1.42
CASC3-207ENST00000581849 CFAP54Q96N23 3096 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 EXOC3O60645 756 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 ATICP31939 592 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 GPR15P49685 360 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 CDR1P51861 262 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 KPNA1P52294 538 aaPredicted RBP23.91■■□□□ 1.42
CASC3-207ENST00000581849 ZNF268Q14587 947 aaPredicted RBP23.91■■□□□ 1.42
CASC3-207ENST00000581849 DDR2Q16832 855 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 GRAMD1CQ8IYS0 662 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 ADSSL1Q8N142 457 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 KIAA0895Q8NCT3 520 aa23.91■■□□□ 1.42
CASC3-207ENST00000581849 GZF1Q9H116 711 aaPredicted RBP23.91■■□□□ 1.42
CASC3-207ENST00000581849 MAGEC2Q9UBF1 373 aaPredicted RBP23.91■■□□□ 1.42
CASC3-207ENST00000581849 A0A1B0GVL5 298 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 SLC38A8A6NNN8 435 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 KINO60870 393 aaKnown RBP23.9■■□□□ 1.42
CASC3-207ENST00000581849 CST3P01034 146 aaPredicted RBP23.9■■□□□ 1.42
CASC3-207ENST00000581849 CHRNB1P11230 501 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 CCNE1P24864 410 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 CTHP32929 405 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 CLDN10P78369 228 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 STK4Q13043 487 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 MTAPQ13126 283 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 LRRC32Q14392 662 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 PPP2R5DQ14738 602 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 KMT5BQ4FZB7 885 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 ZBTB44Q8NCP5 570 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 SYAP1Q96A49 352 aaPredicted RBP23.9■■□□□ 1.42
CASC3-207ENST00000581849 SPATA17Q96L03 361 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 MMS19Q96T76 1030 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 SCAND2PQ9GZW5 306 aaPredicted RBP23.9■■□□□ 1.42
CASC3-207ENST00000581849 VRTNQ9H8Y1 702 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 LMAN1LQ9HAT1 526 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 DMAC2Q9NW81 257 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 ZSCAN32Q9NX65 697 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 MAGED2Q9UNF1 606 aaPredicted RBP23.9■■□□□ 1.42
CASC3-207ENST00000581849 PTPRDP23468 1912 aa23.9■■□□□ 1.42
CASC3-207ENST00000581849 ZNF638Q14966 1978 aaKnown RBP23.89■■□□□ 1.42
CASC3-207ENST00000581849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.89■■□□□ 1.41
CASC3-207ENST00000581849 SPECC1L-ADORA2AF8WAN1 911 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 HCRTO43612 131 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 LMO2P25791 158 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 CSTF1Q05048 431 aaKnown RBP23.89■■□□□ 1.41
CASC3-207ENST00000581849 TRPC3Q13507 836 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 MAB21L3Q8N8X9 362 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 MYCBPAPQ8TBZ2 947 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 MYLPFQ96A32 169 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 CRTAC1Q9NQ79 661 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 TDP1Q9NUW8 608 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 EHD2Q9NZN4 543 aa23.89■■□□□ 1.41
CASC3-207ENST00000581849 PDXKO00764 312 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 TADA3O75528 432 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 SYKP43405 635 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 CCR3P51677 355 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 TNNC1P63316 161 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 CCDC142Q17RM4 750 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 ITPRIPL2Q3MIP1 535 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 WDR72Q3MJ13 1102 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 DGKKQ5KSL6 1271 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 SDHAF4Q5VUM1 108 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 GPIHBP1Q8IV16 184 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 PARD3BQ8TEW8 1205 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 ZNF516Q92618 1163 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 USP13Q92995 863 aaPredicted RBP23.88■■□□□ 1.41
CASC3-207ENST00000581849 FAM83CQ9BQN1 747 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 XYLT2Q9H1B5 865 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 SNX25Q9H3E2 840 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 KCTD10Q9H3F6 313 aa23.88■■□□□ 1.41
CASC3-207ENST00000581849 GREB1Q4ZG55 1949 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms