RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 SLC7A1P30825 629 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 CRHR1P34998 444 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 KIR2DL3P43628 341 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 PIP4K2AP48426 406 aaPredicted RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 AFF3P51826 1226 aaKnown RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 LMOD3Q0VAK6 560 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 TBR1Q16650 682 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 INO80DQ53TQ3 878 aaPredicted RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 STRIP1Q5VSL9 837 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 AGBL4Q5VU57 503 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 OGFOD2Q6N063 350 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 ERAP2Q6P179 960 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 ZNF761Q86XN6 746 aaPredicted RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 OR2C3Q8N628 320 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 TBC1D16Q8TBP0 767 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 PPM1EQ8WY54 764 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 SLC7A6OSQ96CW6 309 aaPredicted RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 ZNF333Q96JL9 665 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 DMRTA2Q96SC8 542 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 OR10A2Q9H208 303 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 WDCPQ9H6R7 721 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 ATP6V0A4Q9HBG4 840 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 BARX1Q9HBU1 254 aaPredicted RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 ING3Q9NXR8 418 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 LRCH1Q9Y2L9 728 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 RBM8AQ9Y5S9 174 aaKnown RBP6.42□□□□□ -1.38
PTPRM-208ENST00000578600 UBN2Q6ZU65 1347 aa6.42□□□□□ -1.38
PTPRM-208ENST00000578600 UBR2Q8IWV8 1755 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ADAMTS20P59510 1910 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 MTSS1O43312 755 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 GPR32O75388 356 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 FTH1P19P0C7X4 201 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 KITP10721 976 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 GYPEP15421 78 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 DDCP20711 480 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ADCY7P51828 1080 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 RRADP55042 308 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 EIF4A1P60842 406 aaKnown RBP6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ADAM8P78325 824 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 TLE1Q04724 770 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 HGFACQ04756 655 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 DUSP2Q05923 314 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 TNFAIP1Q13829 316 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 KCNA10Q16322 511 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ATP2B3Q16720 1220 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 CCDC152Q4G0S7 254 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ZNF648Q5T619 568 aaPredicted RBP6.41□□□□□ -1.38
PTPRM-208ENST00000578600 KRT40Q6A162 431 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 MCM10Q7L590 875 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 GPR155Q7Z3F1 870 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ANKRD42Q8N9B4 389 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 BRIX1Q8TDN6 353 aaKnown RBP6.41□□□□□ -1.38
PTPRM-208ENST00000578600 POF1BQ8WVV4 589 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 SLC38A3Q99624 504 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 POLLQ9UGP5 575 aa6.41□□□□□ -1.38
PTPRM-208ENST00000578600 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
PTPRM-208ENST00000578600 COL1A1P02452 1464 aaPredicted RBP6.41□□□□□ -1.38
PTPRM-208ENST00000578600 ISM1B1AKI9 464 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 ITGA10O75578 1167 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 UFL1O94874 794 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 BRAFP15056 766 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 TNFSF4P23510 183 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 PTPN7P35236 360 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 UBXN2AP68543 259 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 SNAPC2Q13487 334 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 RAPGEF1Q13905 1077 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 NFYCQ13952 458 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 KRT72Q14CN4 511 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 FLYWCH1Q4VC44 716 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 KHDC1LQ5JSQ8 128 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 USP30Q70CQ3 517 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 PDZD4Q76G19 769 aaPredicted RBP6.4□□□□□ -1.38
PTPRM-208ENST00000578600 ZGPATQ8N5A5 531 aaKnown RBP6.4□□□□□ -1.38
PTPRM-208ENST00000578600 IL31RAQ8NI17 732 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 ANKS1AQ92625 1134 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 PHACTR3Q96KR7 559 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 CDC5LQ99459 802 aaKnown RBP6.4□□□□□ -1.38
PTPRM-208ENST00000578600 COA1Q9GZY4 146 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 VPS11Q9H270 941 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 SLC6A15Q9H2J7 730 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 CERS4Q9HA82 394 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 PNPLA8Q9NP80 782 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 STARD7Q9NQZ5 370 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 TRMT13Q9NUP7 481 aaKnown RBP6.4□□□□□ -1.38
PTPRM-208ENST00000578600 RNF114Q9Y508 228 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 PCDHA1Q9Y5I3 950 aa6.4□□□□□ -1.38
PTPRM-208ENST00000578600 XDHP47989 1333 aa6.4□□□□□ -1.39
PTPRM-208ENST00000578600 COL4A5P29400 1685 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 PAPPA2Q9BXP8 1791 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 CCDC189A1A4V9 331 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 NPIPB6E9PJ23 425 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 NRP1O14786 923 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 TEX33O43247 280 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 ADCY6O43306 1168 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 TOX4O94842 621 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 AMY1AP04745 511 aa6.39□□□□□ -1.39
PTPRM-208ENST00000578600 HOXB7P09629 217 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms