RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 SNX27Q96L92 541 aa4.81□□□□□ -1.64
TOP2A-204ENST00000578412 QRSL1Q9H0R6 528 aaKnown RBP4.81□□□□□ -1.64
TOP2A-204ENST00000578412 SERHL2Q9H4I8 314 aa4.81□□□□□ -1.64
TOP2A-204ENST00000578412 ZNHIT2Q9UHR6 403 aa4.81□□□□□ -1.64
TOP2A-204ENST00000578412 USP15Q9Y4E8 981 aaPredicted RBP4.81□□□□□ -1.64
TOP2A-204ENST00000578412 PIEZO1Q92508 2521 aa4.81□□□□□ -1.64
TOP2A-204ENST00000578412 KDM3BQ7LBC6 1761 aa4.81□□□□□ -1.64
TOP2A-204ENST00000578412 ASTN2O75129 1339 aaPredicted RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 GOLGA8AA7E2F4 631 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 TLR2O60603 784 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 NTSR2O95665 410 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 GASTP01350 101 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 RBP3P10745 1247 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 ZSCAN20P17040 1043 aaPredicted RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 ENPP1P22413 925 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 MGAT1P26572 445 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 SCAND1P57086 179 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 SESN3P58005 492 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 RAP2BP61225 183 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 BMT2Q1RMZ1 405 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 ODR4Q5SWX8 454 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 DPY19L2P1Q6NXN4 242 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 DRICH1Q6PGQ1 229 aaPredicted RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 FMNL3Q8IVF7 1028 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 CCAR1Q8IX12 1150 aaKnown RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 EXOC8Q8IYI6 725 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 CPEB3Q8NE35 698 aaKnown RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 MORC4Q8TE76 937 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 PNISRQ8TF01 805 aaKnown RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 RIN2Q8WYP3 895 aaPredicted RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 RIOX1Q9H6W3 641 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 HOMER2Q9NSB8 354 aa4.8□□□□□ -1.64
TOP2A-204ENST00000578412 APOBEC2Q9Y235 224 aaKnown RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 RRP7AQ9Y3A4 280 aaKnown RBP4.8□□□□□ -1.64
TOP2A-204ENST00000578412 ZNF646O15015 1829 aaPredicted RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 SH3TC1Q8TE82 1336 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 GAGE12BA1L429 117 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 TMEM200CA6NKL6 621 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 WNT10BO00744 389 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 BRINP1O60477 761 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 LMNAP02545 664 aaKnown RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 CETPP11597 493 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 CPEP16870 476 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 PSMC4P43686 418 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 CHN2P52757 468 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 USP14P54578 494 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 RPS8P62241 208 aaKnown RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 BEAN1Q3B7T3 259 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 PLXDC1Q8IUK5 500 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 ZFP28Q8NHY6 868 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 TBC1D16Q8TBP0 767 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 STON2Q8WXE9 905 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 CAVIN3Q969G5 261 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 RAX2Q96IS3 184 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 ACAP3Q96P50 834 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 UHRF1Q96T88 793 aaPredicted RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 LBHD1Q9BQE6 289 aaPredicted RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 PCGF6Q9BYE7 350 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 DEFB129Q9H1M3 183 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 POLLQ9UGP5 575 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 TRMT112Q9UI30 125 aaKnown RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 KNSTRNQ9Y448 316 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 NCOR1O75376 2440 aa4.79□□□□□ -1.64
TOP2A-204ENST00000578412 COL1A1P02452 1464 aaPredicted RBP4.79□□□□□ -1.64
TOP2A-204ENST00000578412 RTL9Q8NET4 1388 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 UNC80Q8N2C7 3258 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 DDX60Q8IY21 1712 aaKnown RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CCL15-CCL14A0A0B4J2E2 113 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 DIRC3C9JPN6 131 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 HTATSF1O43719 755 aaKnown RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 PHF2O75151 1096 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 PEX14O75381 377 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 UFL1O94874 794 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 SPATA31D3P0C874 917 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CNGA1P29973 690 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CRHR1P34998 444 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 PER3P56645 1201 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 GPSM2P81274 684 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 GUCY1B3Q02153 619 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 RESTQ13127 1097 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 TP53BP2Q13625 1128 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 TNFAIP1Q13829 316 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CCL15Q16663 113 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 ATXN7L2Q5T6C5 722 aaPredicted RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 FAM102AQ5T9C2 384 aaPredicted RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 Q6YL49 198 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 SPATA31D4Q6ZUB0 917 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 ARHGEF19Q8IW93 802 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CCDC146Q8IYE0 955 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 PAWRQ96IZ0 340 aaKnown RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 GUCD1Q96NT3 240 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 NEU1Q99519 415 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 P2RX7Q99572 595 aaKnown RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CDX2Q99626 313 aaPredicted RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 VTA1Q9NP79 307 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 GEMIN8Q9NWZ8 242 aaKnown RBP4.78□□□□□ -1.64
TOP2A-204ENST00000578412 TCEAL9Q9UHQ7 104 aa4.78□□□□□ -1.64
TOP2A-204ENST00000578412 CENPFP49454 3210 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms