RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 ECT2Q9H8V3 914 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 KIAA1586Q9HCI6 787 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
SMARCE1-214ENST00000578112 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 SLC9A3R1O14745 358 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 EXTL3O43909 919 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 PDCP20941 246 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 NMT1P30419 496 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 MPLP40238 635 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 ACOT2P49753 483 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 SNRPFP62306 86 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 MRPS21P82921 87 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 LPAL2Q16609 132 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 PREPLQ4J6C6 727 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 STPG1Q5TH74 334 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 FAM171BQ6P995 826 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 PDCL2Q8N4E4 241 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 KCNV2Q8TDN2 545 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 ZFYVE19Q96K21 471 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 GCNT4Q9P109 453 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 EVLQ9UI08 416 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 CDH9Q9ULB4 789 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 ZNF292O60281 2723 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 SCN1AP35498 2009 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 RALGAPA1Q6GYQ0 2036 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 CSRP1P21291 193 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 GJA4P35212 333 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 GALK1P51570 392 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 MYO1EQ12965 1108 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 LMBRD2Q68DH5 695 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 HEATR6Q6AI08 1181 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 RASSF3Q86WH2 238 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 SPATA2LQ8IUW3 424 aaPredicted RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 MAB21L3Q8N8X9 362 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 GIPC2Q8TF65 315 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 PLIN2Q99541 437 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 TTLL2Q9BWV7 592 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 COMMD8Q9NX08 183 aa12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 DUS2Q9NX74 493 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-214ENST00000578112 ZNF638Q14966 1978 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 TRIM66O15016 1216 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SOAT2O75908 522 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 EGFP01133 1207 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 TNK2Q07912 1038 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 EML3Q32P44 896 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SV2BQ7L1I2 683 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 OVCA2Q8WZ82 227 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 CHFRQ96EP1 664 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 CNOT6LQ96LI5 555 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 DUSP15Q9H1R2 295 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 USP34Q70CQ2 3546 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 PLXND1Q9Y4D7 1925 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SPTBN4Q9H254 2564 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 BCLAF3A2AJT9 711 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 RNF40O75150 1001 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 WARSP23381 471 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SLC7A9P82251 487 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SRSF5Q13243 272 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 USP39Q53GS9 565 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 LARP1BQ659C4 914 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SFR1Q86XK3 245 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 CXorf38Q8TB03 319 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 ANKRD36BP1Q96IX9 119 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 ZHX3Q9H4I2 956 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 EBF3Q9H4W6 596 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 RBAKQ9NYW8 714 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 L1RE1Q9UN81 338 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 AGAP1Q9UPQ3 857 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 R3HCC1Q9Y3T6 440 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 SRPRBQ9Y5M8 271 aaKnown RBP12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 MYO16Q9Y6X6 1858 aa12.05□□□□□ -0.48
SMARCE1-214ENST00000578112 UBE4BO95155 1302 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 TADA3O75528 432 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 ALDH1A2O94788 518 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 STAU1O95793 577 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 ADSSP30520 456 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 POLR2BP30876 1174 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 HOXD12P35452 270 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 DMC1Q14565 340 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 N4BP2L1Q5TBK1 243 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 ADGRF2Q8IZF7 708 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 C1orf127Q8N9H9 656 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 OTUB2Q96DC9 234 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 C8orf48Q96LL4 319 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 MRPL44Q9H9J2 332 aaKnown RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 MAGEC2Q9UBF1 373 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 A0A0A0MRY4 1105 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 UPK3BL1B0FP48 263 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 UPK3BL2E5RIL1 263 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 KCNK5O95279 499 aa12.04□□□□□ -0.48
SMARCE1-214ENST00000578112 OLFM2O95897 454 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms