RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ACO1P21399 889 aaKnown RBP18.37■□□□□ 0.53
LITAF-212ENST00000573332 EPHB3P54753 998 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 RPL10AP62906 217 aaKnown RBP18.37■□□□□ 0.53
LITAF-212ENST00000573332 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 TJAP1Q5JTD0 557 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 ARHGEF19Q8IW93 802 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 ELMOD1Q8N336 334 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 FAM200AQ8TCP9 573 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 PHF7Q9BWX1 381 aaPredicted RBP18.37■□□□□ 0.53
LITAF-212ENST00000573332 B3GNT5Q9BYG0 378 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 ELOVL4Q9GZR5 314 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 VPS16Q9H269 839 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 CEP72Q9P209 647 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 DNMT3BQ9UBC3 853 aaKnown RBP18.37■□□□□ 0.53
LITAF-212ENST00000573332 APEX2Q9UBZ4 518 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 CDH22Q9UJ99 828 aa18.37■□□□□ 0.53
LITAF-212ENST00000573332 ATP1A3P13637 1013 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 ATF6P18850 670 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 CYP2F1P24903 491 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 RAD23BP54727 409 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 EPHA5P54756 1037 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 ZNF445P59923 1031 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 IQCEQ6IPM2 695 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 DPY19L2P1Q6NXN4 242 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 PAQR9Q6ZVX9 377 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 KAT5Q92993 513 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 PSMG2Q969U7 264 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 ZNF512Q96ME7 567 aaPredicted RBP18.36■□□□□ 0.53
LITAF-212ENST00000573332 KREMEN1Q96MU8 473 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 SEPT5Q99719 369 aaPredicted RBP18.36■□□□□ 0.53
LITAF-212ENST00000573332 LPIN3Q9BQK8 851 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 POMKQ9H5K3 350 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 SIX2Q9NPC8 291 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 CNTN6Q9UQ52 1028 aa18.36■□□□□ 0.53
LITAF-212ENST00000573332 XIRP2A4UGR9 3374 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 CLUHO75153 1309 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 LGALS16A8MUM7 142 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 PES1O00541 588 aaKnown RBP18.35■□□□□ 0.53
LITAF-212ENST00000573332 BDNFP23560 247 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 MFAP3P55082 362 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 CYP27A1Q02318 531 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 FKBP15Q5T1M5 1219 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 RRAGAQ7L523 313 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 GRASPQ7Z6J2 395 aaPredicted RBP18.35■□□□□ 0.53
LITAF-212ENST00000573332 ITIH5Q86UX2 942 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 LUZP1Q86V48 1076 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 FUKQ8N0W3 1084 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 SLC4A11Q8NBS3 891 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 LEMD2Q8NC56 503 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 HNRNPABQ99729 332 aaKnown RBP18.35■□□□□ 0.53
LITAF-212ENST00000573332 UBE2TQ9NPD8 197 aaPredicted RBP18.35■□□□□ 0.53
LITAF-212ENST00000573332 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 USTQ9Y2C2 406 aa18.35■□□□□ 0.53
LITAF-212ENST00000573332 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
LITAF-212ENST00000573332 ATP8B3O60423 1300 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 SOAT2O75908 522 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 PAEPP09466 180 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 TPM4P67936 248 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 ORC1Q13415 861 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 VEPH1Q14D04 833 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 ZNF394Q53GI3 561 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 DNAJB7Q7Z6W7 309 aaPredicted RBP18.34■□□□□ 0.53
LITAF-212ENST00000573332 FAM35AQ86V20 835 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 ADHFE1Q8IWW8 467 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 C12orf29Q8N999 325 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 CYFIP2Q96F07 1278 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 SPATA17Q96L03 361 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 C8orf48Q96LL4 319 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 LRRC3Q9BY71 257 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 ZNF518BQ9C0D4 1074 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 PLCB1Q9NQ66 1216 aa18.34■□□□□ 0.53
LITAF-212ENST00000573332 TRIM66O15016 1216 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 MICAL2O94851 1124 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 RHOP08100 348 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 CSH1P0DML2 217 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 CSH2P0DML3 217 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 RFX1P22670 979 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 CDR1P51861 262 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 ZNF132P52740 706 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 DDR2Q16832 855 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 PABPC1LQ4VXU2 614 aaKnown RBP18.33■□□□□ 0.52
LITAF-212ENST00000573332 ARHGAP17Q68EM7 881 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 SLC2A14Q8TDB8 520 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 SMARCD1Q96GM5 515 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 HEXIM2Q96MH2 286 aaKnown RBP18.33■□□□□ 0.52
LITAF-212ENST00000573332 ERGIC2Q96RQ1 377 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 CSNK1G1Q9HCP0 422 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 HCFC1R1Q9NWW0 138 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 DAAM1Q9Y4D1 1078 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 PCDHB4Q9Y5E5 795 aa18.33■□□□□ 0.52
LITAF-212ENST00000573332 C19orf67A6NJJ6 358 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 GOLGA6L19H0YKK7 550 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 CLDN5O00501 218 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 ZNF197O14709 1029 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 VDRP11473 427 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 CCDC130P13994 396 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 FSHRP23945 695 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 GRIK1P39086 918 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms