RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ATP8B4Q8TF62 1192 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 CHTF18Q8WVB6 975 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 POF1BQ8WVV4 589 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 NEK1Q96PY6 1258 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 LRRCC1Q9C099 1032 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 RC3H2Q9HBD1 1191 aaKnown RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 CRTAC1Q9NQ79 661 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 DSEQ9UL01 958 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 SORCS3Q9UPU3 1222 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 MRPL11Q9Y3B7 192 aaKnown RBP6.85□□□□□ -1.31
UBFD1-209ENST00000569919 NR2E1Q9Y466 385 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 TRIOO75962 3097 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 MYH7P12883 1935 aa6.85□□□□□ -1.31
UBFD1-209ENST00000569919 MYH7BA7E2Y1 1941 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 KRT37O76014 449 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 CSPG5O95196 566 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 GGPS1O95749 300 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 GLP2RO95838 553 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 CHRNA1P02708 482 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 PNLIPP16233 465 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 HOXB8P17481 243 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-209ENST00000569919 DNAJB1P25685 340 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 ARL4AP40617 200 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 TMPRSS15P98073 1019 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 LRP8Q14114 963 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 PUM1Q14671 1186 aaKnown RBP eCLIP6.84□□□□□ -1.31
UBFD1-209ENST00000569919 STEAP3Q658P3 488 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 FAM43BQ6ZT52 329 aaPredicted RBP6.84□□□□□ -1.31
UBFD1-209ENST00000569919 RASGRP2Q7LDG7 609 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 SAMD3Q8N6K7 520 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 TMEM105Q8N8V8 129 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 BOCQ9BWV1 1114 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 S1PR5Q9H228 398 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 MFSD1Q9H3U5 465 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 PXMP2Q9NR77 195 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 SPTLC3Q9NUV7 552 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 SETD4Q9NVD3 440 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 APOBEC2Q9Y235 224 aaKnown RBP6.84□□□□□ -1.31
UBFD1-209ENST00000569919 CACNA1AO00555 2505 aa6.84□□□□□ -1.31
UBFD1-209ENST00000569919 SPTBN4Q9H254 2564 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 NRCAMQ92823 1304 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 MED19A0JLT2 244 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 MAN2B1O00754 1011 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 HGSO14964 777 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 PER2O15055 1255 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 CFBP00751 764 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 LGALS2P05162 132 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SNHG28P0DPA3 235 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 MYCLP12524 364 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SLC6A11P48066 632 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 LSSP48449 732 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 KPNA1P52294 538 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 ADAM17P78536 824 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 EXOSC10Q01780 885 aaKnown RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 ALX1Q15699 326 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 DUSP6Q16828 381 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 EMC4Q5J8M3 183 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 CREB3L3Q68CJ9 461 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 ANKRD54Q6NXT1 300 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 TAF2Q6P1X5 1199 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 STOX1Q6ZVD7 989 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SPATS2Q86XZ4 545 aaKnown RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 ABI1Q8IZP0 508 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 UHMK1Q8TAS1 419 aaKnown RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 ABHD4Q8TB40 342 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 KCNG4Q8TDN1 519 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 RMDN1Q96DB5 314 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SEC62Q99442 399 aaKnown RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 FTHL17Q9BXU8 183 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 CD244Q9BZW8 370 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 UBA5Q9GZZ9 404 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 RNF32Q9H0A6 362 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 RXFP1Q9HBX9 757 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 ZBTB40Q9NUA8 1239 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 OXSMQ9NWU1 459 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 H2AFY2Q9P0M6 372 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-209ENST00000569919 COL20A1Q9P218 1284 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SRPK3Q9UPE1 567 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SIT1Q9Y3P8 196 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 SQORQ9Y6N5 450 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 KIAA1217Q5T5P2 1943 aa6.83□□□□□ -1.32
UBFD1-209ENST00000569919 CACNA1HO95180 2353 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 USP34Q70CQ2 3546 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 SLC27A2O14975 620 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 MAFKO60675 156 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 KATNA1O75449 491 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 TADA3O75528 432 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 LMNAP02545 664 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 RPLP2P05387 115 aaKnown RBP6.82□□□□□ -1.32
UBFD1-209ENST00000569919 GHRP10912 638 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 TECP42680 631 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 HSD17B4P51659 736 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 IRF9Q00978 393 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 OCRLQ01968 901 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 SP2Q02086 613 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 ITIH3Q06033 890 aa6.82□□□□□ -1.32
UBFD1-209ENST00000569919 NEDD9Q14511 834 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms