RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 A0A1W2PRG6 482 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CENPBD1B2RD01 187 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 NBNO60934 754 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 POLBP06746 335 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 KLRC1P26715 233 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 TGFBR2P37173 567 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 MAGEA10P43363 369 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 KCNT1Q5JUK3 1230 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PDZK1Q5T2W1 519 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PI16Q6UXB8 463 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 VPS37AQ8NEZ2 397 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SPATA7Q9P0W8 599 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SERPINB13Q9UIV8 391 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PADI4Q9UM07 663 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 IGSF1Q8N6C5 1336 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 MAGEB2O15479 319 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 STX11O75558 287 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 FAM228BP0C875 321 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PMLP29590 882 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 HNRNPH3P31942 346 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 GRK3P35626 688 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SARSP49591 514 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 OTUD4Q01804 1114 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 FAM98BQ52LJ0 330 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 TTMPQ5BVD1 217 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 FAM102BQ5T8I3 360 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ANKRD40Q6AI12 368 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 MZT2AQ6P582 158 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 IYDQ6PHW0 289 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CCDC149Q6ZUS6 474 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CREG2Q8IUH2 290 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SPICE1Q8N0Z3 855 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF512BQ96KM6 892 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 EPAS1Q99814 870 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PDCD10Q9BUL8 212 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SLC22A2O15244 555 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 DLATP10515 647 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CIITAP33076 1130 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 GRIK1P39086 918 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 VAMP7P51809 220 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CTSWP56202 376 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PSMC6P62333 389 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ITGADQ13349 1161 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 COG2Q14746 738 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 C3orf62Q6ZUJ4 267 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 GLYCTKQ8IVS8 523 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ALDH16A1Q8IZ83 802 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 AP3S1Q92572 193 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CEP170P1Q96L14 293 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PCDH9Q9HC56 1237 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 TUFT1Q9NNX1 390 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PNPLA8Q9NP80 782 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 KMT5AQ9NQR1 393 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 COMMD8Q9NX08 183 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 FRMPD4Q14CM0 1322 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PRR29P0C7W0 189 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 KITP10721 976 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 XPAP23025 273 aaPredicted RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 EPHB2P29323 1055 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SDC4P31431 198 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 RBM44Q6ZP01 1051 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 C4orf33Q8N1A6 199 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 TMA16Q96EY4 203 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ACSBG1Q96GR2 724 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 AGBL1Q96MI9 1066 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 NMRK1Q9NWW6 199 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 IMPAD1Q9NX62 359 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 COQ6Q9Y2Z9 468 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 NLRP1Q9C000 1473 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CLDN25C9JDP6 229 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ASS1P00966 412 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 OATP04181 439 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 RAG1P15918 1043 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PABPC4Q13310 644 aaKnown RBP eCLIP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 C5orf22Q49AR2 442 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 FOXR1Q6PIV2 292 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 BTN2A1Q7KYR7 527 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 DAGLBQ8NCG7 672 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 EXD1Q8NHP7 514 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 TRIM54Q9BYV2 358 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 TAS2R1Q9NYW7 299 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ZSWIM5Q9P217 1185 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ANKRD6Q9Y2G4 727 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 SNX13Q9Y5W8 968 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 APOL1O14791 398 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 DNAJB5O75953 348 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CCNE2O96020 404 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PRLP01236 227 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 MAPK1P28482 360 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CCT8P50990 548 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 KLHDC7AQ5VTJ3 777 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 METTL21CQ5VZV1 264 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 DHFR2Q86XF0 187 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 EFHBQ8N7U6 833 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 CCNYQ8ND76 341 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 PTCD3Q96EY7 689 aaKnown RBP7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
CNOT1-216ENST00000569240 ZC3H12CQ9C0D7 883 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms