RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CYFIP2Q96F07 1278 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 GPR88Q9GZN0 384 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 NLRC4Q9NPP4 1024 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 FAM49BQ9NUQ9 324 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 CLEC1BQ9P126 229 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 KIAA1257Q9ULG3 409 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 REV3LO60673 3130 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 PLXNA3P51805 1871 aa17.8■□□□□ 0.44
COMMD4-224ENST00000568877 SPDYE4A6NLX3 237 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 F8VZ95 297 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 TBX10O75333 385 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 ZMYND10O75800 440 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 HAPLN1P10915 354 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-224ENST00000568877 VDRP11473 427 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 CCDC130P13994 396 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 BDNFP23560 247 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 CYP2F1P24903 491 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 DLX2Q07687 328 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-224ENST00000568877 MGAT5BQ3V5L5 792 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 PPM1LQ5SGD2 360 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 PAQR9Q6ZVX9 377 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 CACNA2D4Q7Z3S7 1137 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 FUKQ8N0W3 1084 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 TTC9BQ8N6N2 239 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 SLC2A14Q8TDB8 520 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 SEPT5Q99719 369 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-224ENST00000568877 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
COMMD4-224ENST00000568877 MED10Q9BTT4 135 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 CEP72Q9P209 647 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 INSL5Q9Y5Q6 135 aa17.79■□□□□ 0.44
COMMD4-224ENST00000568877 ATP8B3O60423 1300 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-224ENST00000568877 CLDN5O00501 218 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 RFPL2O75678 378 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 PNMA6AP0CW24 399 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-224ENST00000568877 CD19P15391 556 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 HOXB8P17481 243 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-224ENST00000568877 HOXA9P31269 272 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 MAGEA11P43364 429 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 JAM2P57087 298 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 SGO2Q562F6 1265 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 ARHGAP17Q68EM7 881 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 SYCE2Q6PIF2 218 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 VSTM1Q6UX27 236 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 FAM71AQ8IYT1 594 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 C12orf76Q8N812 135 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-224ENST00000568877 SPAG5Q96R06 1193 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 NUP58Q9BVL2 599 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 RHOBTB2Q9BYZ6 727 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 ZNF518BQ9C0D4 1074 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 SFXN1Q9H9B4 322 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 ZDHHC7Q9NXF8 308 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 YIPF1Q9Y548 306 aa17.78■□□□□ 0.44
COMMD4-224ENST00000568877 ITIH6Q6UXX5 1313 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 CCDC195A0A1B0GUA6 201 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 CYP26A1O43174 497 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 SOAT2O75908 522 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 HNRNPA1P09651 372 aaKnown RBP eCLIP17.77■□□□□ 0.44
COMMD4-224ENST00000568877 ALDH1A3P47895 512 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 TWF1Q12792 350 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 FIGNQ5HY92 759 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 PPP1R26Q5T8A7 1209 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-224ENST00000568877 FAM35AQ86V20 835 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 TFAP2BQ92481 460 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 HLA-CQ95604 372 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 MSLNLQ96KJ4 702 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 EDEM3Q9BZQ6 932 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 TTYH3Q9C0H2 523 aa17.77■□□□□ 0.44
COMMD4-224ENST00000568877 UBE2ZQ9H832 354 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-224ENST00000568877 PAPLNO95428 1278 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 CALCAP01258 141 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 LRG1P02750 347 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 ADORA2BP29275 332 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 GNA15P30679 374 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 CLCN1P35523 988 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 SOX5P35711 763 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 GRIK1P39086 918 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 STAT1P42224 750 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 RPL10AP62906 217 aaKnown RBP17.76■□□□□ 0.43
COMMD4-224ENST00000568877 PTK2Q05397 1052 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 PLD1Q13393 1074 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 RARS2Q5T160 578 aaKnown RBP17.76■□□□□ 0.43
COMMD4-224ENST00000568877 SPECC1LQ69YQ0 1117 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 TMC5Q6UXY8 1006 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 VSTM4Q8IW00 320 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 SCN4BQ8IWT1 228 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 CMASQ8NFW8 434 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-224ENST00000568877 IQCDQ96DY2 449 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 SMARCD1Q96GM5 515 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 ZSWIM1Q9BR11 485 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 PRKD2Q9BZL6 878 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 ACP6Q9NPH0 428 aa17.76■□□□□ 0.43
COMMD4-224ENST00000568877 O00370 1275 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 TRIM66O15016 1216 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 CCL16O15467 120 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 AP1G2O75843 785 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 GFPT2O94808 682 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 POU2F2P09086 479 aa17.75■□□□□ 0.43
COMMD4-224ENST00000568877 FAM200BP0CF97 657 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms