RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 MYL7Q01449 175 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 CUL4BQ13620 913 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 PON2Q15165 354 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 ITPRIPL2Q3MIP1 535 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 INTS6LQ5JSJ4 861 aaKnown RBP19.84■□□□□ 0.77
CLN6-204ENST00000564752 TXNDC8Q6A555 127 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 EPM2AIP1Q7L775 607 aaPredicted RBP19.84■□□□□ 0.77
CLN6-204ENST00000564752 GRAMD1CQ8IYS0 662 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 TOP6BLQ8N6T0 577 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 MAB21L3Q8N8X9 362 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 FAM83CQ9BQN1 747 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 MTMR12Q9C0I1 747 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 ABCB6Q9NP58 842 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 GKN1Q9NS71 199 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 GTF3C4Q9UKN8 822 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 CCL26Q9Y258 94 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
CLN6-204ENST00000564752 PVALEFA0A1B0GWK0 134 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 K7ESF4 209 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 GABRDO14764 452 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 ACTN4O43707 911 aaKnown RBP19.83■□□□□ 0.77
CLN6-204ENST00000564752 TMEM191BP0C7N4 346 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 TGM1P22735 817 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 CMA1P23946 247 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 LHX1P48742 406 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 RPL10AP62906 217 aaKnown RBP19.83■□□□□ 0.77
CLN6-204ENST00000564752 EHHADHQ08426 723 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 CCINQ13939 588 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 DDR2Q16832 855 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 RSPO4Q2I0M5 234 aaPredicted RBP19.83■□□□□ 0.77
CLN6-204ENST00000564752 SDHAF4Q5VUM1 108 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 Q6ZS52 159 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 MON1AQ86VX9 555 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 OSTM1Q86WC4 334 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 SYNPOQ8N3V7 929 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 ZNF507Q8TCN5 953 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 USP13Q92995 863 aaPredicted RBP19.83■□□□□ 0.77
CLN6-204ENST00000564752 TDP1Q9NUW8 608 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 INTS13Q9NVM9 706 aa19.83■□□□□ 0.77
CLN6-204ENST00000564752 MAGED2Q9UNF1 606 aaPredicted RBP19.83■□□□□ 0.77
CLN6-204ENST00000564752 A0A1B0GVL5 298 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 HOXD13P35453 343 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 DMWDQ09019 674 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 SOWAHAQ2M3V2 549 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 LMBRD2Q68DH5 695 aaPredicted RBP19.82■□□□□ 0.76
CLN6-204ENST00000564752 DPH6Q7L8W6 267 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 LIMS2Q7Z4I7 341 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 NELFCDQ8IXH7 590 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 ADGRF2Q8IZF7 708 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 STKLD1Q8NE28 680 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 MRPS31Q92665 395 aaKnown RBP19.82■□□□□ 0.76
CLN6-204ENST00000564752 ANKRD36BP1Q96IX9 119 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 SCAND2PQ9GZW5 306 aaPredicted RBP19.82■□□□□ 0.76
CLN6-204ENST00000564752 C2orf42Q9NWW7 574 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 HSPBP1Q9NZL4 362 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 USP25Q9UHP3 1055 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 GMEB2Q9UKD1 530 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 RAB23Q9ULC3 237 aa19.82■□□□□ 0.76
CLN6-204ENST00000564752 ZNF233A6NK53 670 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 CHURC1-FNTBB4DL54 471 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 HRO43593 1189 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 HCRTO43612 131 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 NOL4O94818 638 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 PCSK1P29120 753 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 FNTBP49356 437 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 MYO1EQ12965 1108 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 RUNX3Q13761 415 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 SURF1Q15526 300 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 DUOXA2Q1HG44 320 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 CFAP221Q4G0U5 840 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 FAM171BQ6P995 826 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 HS2ST1Q7LGA3 356 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 CBWD2Q8IUF1 395 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 OR5B17Q8NGF7 314 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 SCFD1Q8WVM8 642 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 TRMT2BQ96GJ1 504 aaKnown RBP19.81■□□□□ 0.76
CLN6-204ENST00000564752 PAGE5Q96GU1 130 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 FUBP3Q96I24 572 aaKnown RBP eCLIP19.81■□□□□ 0.76
CLN6-204ENST00000564752 MYRFLQ96LU7 910 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 KIF9Q9HAQ2 790 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 KIAA1586Q9HCI6 787 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 SLC39A2Q9NP94 309 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 HPS4Q9NQG7 708 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 AGPAT3Q9NRZ7 376 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 EXOC1Q9NV70 894 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 UXTQ9UBK9 157 aaPredicted RBP19.81■□□□□ 0.76
CLN6-204ENST00000564752 HPSEQ9Y251 543 aa19.81■□□□□ 0.76
CLN6-204ENST00000564752 PTPRJQ12913 1337 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 OTOL1A6NHN0 477 aaPredicted RBP19.8■□□□□ 0.76
CLN6-204ENST00000564752 PRR5-ARHGAP8B1AHC4 643 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 HOXA6P31267 233 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 CNR2P34972 360 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 ARHGAP8P85298 464 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 ZNF268Q14587 947 aaPredicted RBP19.8■□□□□ 0.76
CLN6-204ENST00000564752 LPAL2Q16609 132 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 CCDC142Q17RM4 750 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 LAIR1Q6GTX8 287 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 LONP2Q86WA8 852 aa19.8■□□□□ 0.76
CLN6-204ENST00000564752 SPATA2LQ8IUW3 424 aaPredicted RBP19.8■□□□□ 0.76
CLN6-204ENST00000564752 HPDLQ96IR7 371 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms