RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 BLOC1S4Q9NUP1 217 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 FAM86C1Q9NVL1 165 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 SAMD15Q9P1V8 674 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 SUCLA2Q9P2R7 463 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-212ENST00000564503 RAPGEFL1Q9UHV5 662 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 MAD2L2Q9UI95 211 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 TTC7AQ9ULT0 858 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-212ENST00000564503 PACSIN2Q9UNF0 486 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-212ENST00000564503 SLC12A4Q9UP95 1085 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 STXBP5LQ9Y2K9 1186 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 C15orf41Q9Y2V0 281 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 UTP11Q9Y3A2 253 aaKnown RBP5.08□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF451Q9Y4E5 1061 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 IRAK3Q9Y616 596 aa5.08□□□□□ -1.6
CAPN3-212ENST00000564503 BCL9O00512 1426 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 NCANO14594 1321 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 LTBP3Q9NS15 1303 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 KDM3AQ9Y4C1 1321 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ESYT2A0FGR8 921 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SMCO2A6NFE2 343 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CCDC169A6NNP5 214 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 F8W031 263 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 hCG_1984214I3L0E3 225 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SNAP23O00161 211 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 RFXAPO00287 272 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TRAF5O00463 557 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 KRIT1O00522 736 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SCAMP3O14828 347 aaKnown RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 LIN7AO14910 233 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 NKRFO15226 690 aaKnown RBP eCLIP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 DAPK3O43293 454 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CREB3O43889 395 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 NMT2O60551 498 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CTNND1O60716 968 aaKnown RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ATP2C2O75185 946 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 FLOT1O75955 427 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 GFPT2O94808 682 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PARNO95453 639 aaKnown RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 AGTP01019 485 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 NUDT17P0C025 328 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ZBTB48P10074 688 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CHN1P15882 459 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PAX7P23759 505 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CCND1P24385 295 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SMARCA1P28370 1054 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PRKCIP41743 596 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 EPS15P42566 896 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TFAP4Q01664 338 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ICA1Q05084 483 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ADCY2Q08462 1091 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 COASYQ13057 564 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PDIA5Q14554 519 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PPP2R5AQ15172 486 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TRADDQ15628 312 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CALCRLQ16602 461 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 LETM2Q2VYF4 491 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ZCWPW2Q504Y3 356 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PARP10Q53GL7 1025 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 CAVIN4Q5BKX8 364 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SOGA3Q5TF21 947 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SUSD4Q5VX71 490 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 OLFML2BQ68BL8 750 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 BTNL9Q6UXG8 535 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TRPM8Q7Z2W7 1104 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PEX26Q7Z412 305 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 VPS36Q86VN1 386 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 LSRQ86X29 649 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 DDX42Q86XP3 938 aaKnown RBP eCLIP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TRIM59Q8IWR1 403 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ZC3H3Q8IXZ2 948 aaKnown RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 METTL13Q8N6R0 699 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF713Q8N859 430 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 LRRC57Q8N9N7 239 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ATXN2LQ8WWM7 1075 aaKnown RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 HPS3Q969F9 1004 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PGM2Q96G03 612 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 EEF2KMTQ96G04 330 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ANKRD27Q96NW4 1050 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 NAP1L3Q99457 506 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 FMO2Q99518 471 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SELENOSQ9BQE4 189 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SPZ1Q9BXG8 430 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 PACSIN1Q9BY11 444 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 TXLNGYQ9BZA5 131 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 DDX47Q9H0S4 455 aaKnown RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 HOMER3Q9NSC5 361 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 GINM1Q9NU53 330 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 BAIAP2L1Q9UHR4 511 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 RASAL2Q9UJF2 1139 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 AMFRQ9UKV5 643 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF214Q9UL59 606 aaPredicted RBP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ASAP1Q9ULH1 1129 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ZBTB1Q9Y2K1 713 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.07□□□□□ -1.6
CAPN3-212ENST00000564503 SIPA1L1O43166 1804 aa5.07□□□□□ -1.6
CAPN3-212ENST00000564503 ADAMTS20P59510 1910 aa5.06□□□□□ -1.6
CAPN3-212ENST00000564503 NUDT19A8MXV4 375 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms