RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 UBR7Q8N806 425 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 SLC4A11Q8NBS3 891 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 MYLPFQ96A32 169 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 CEP295NLQ96MC4 621 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 PCMTD1Q96MG8 357 aaPredicted RBP17.4■□□□□ 0.38
USB1-206ENST00000562534 KREMEN1Q96MU8 473 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 TWNKQ96RR1 684 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 SEPT5Q99719 369 aaPredicted RBP17.4■□□□□ 0.38
USB1-206ENST00000562534 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 ELOVL4Q9GZR5 314 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 CNTN6Q9UQ52 1028 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 MTCL1Q9Y4B5 1905 aaKnown RBP17.4■□□□□ 0.38
USB1-206ENST00000562534 ATP8B3O60423 1300 aa17.4■□□□□ 0.38
USB1-206ENST00000562534 A0A1B0GTH6 734 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 PTPN2P17706 415 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 BDNFP23560 247 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 MRPS5P82675 430 aaKnown RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 TWF1Q12792 350 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 SMAD4Q13485 552 aaKnown RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 SYCP1Q15431 976 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 DPY19L2P1Q6NXN4 242 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 C12orf29Q8N999 325 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 RNF214Q8ND24 703 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 SMG7Q92540 1137 aaKnown RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 KAT5Q92993 513 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 NAP1L5Q96NT1 182 aaPredicted RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 NECTIN4Q96NY8 510 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 HNRNPABQ99729 332 aaKnown RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 MED10Q9BTT4 135 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 APOL5Q9BWW9 433 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 LSM14BQ9BX40 385 aaKnown RBP17.39■□□□□ 0.37
USB1-206ENST00000562534 CRISPLD1Q9H336 500 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 HMGXB4Q9UGU5 601 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 SIK3Q9Y2K2 1263 aa17.39■□□□□ 0.37
USB1-206ENST00000562534 CCL16O15467 120 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 TEX33O43247 280 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 MBTPS2O43462 519 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 TPM3P06753 285 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 VDRP11473 427 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 UCHL3P15374 230 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 GRIK1P39086 918 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 ORC1Q13415 861 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 VEPH1Q14D04 833 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 CLUL1Q15846 466 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 ARHGAP44Q17R89 818 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 GJB7Q6PEY0 223 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 ITIH5Q86UX2 942 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 NEK11Q8NG66 645 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 ZNF707Q96C28 371 aaPredicted RBP17.38■□□□□ 0.37
USB1-206ENST00000562534 STK33Q9BYT3 514 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 YIPF1Q9Y548 306 aa17.38■□□□□ 0.37
USB1-206ENST00000562534 TSC2P49815 1807 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 PLXNA3P51805 1871 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 A0A1W2PQC6 194 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 GRXCR2A6NFK2 248 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 RNF225M0QZC1 329 aaPredicted RBP17.37■□□□□ 0.37
USB1-206ENST00000562534 TRIM66O15016 1216 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 KRT5P13647 590 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 CDR1P51861 262 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 APBA1Q02410 837 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 TFF2Q03403 129 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 STILQ15468 1287 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 TAF12Q16514 161 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 SGO2Q562F6 1265 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 ARHGAP17Q68EM7 881 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 PTCRAQ6ISU1 281 aaPredicted RBP17.37■□□□□ 0.37
USB1-206ENST00000562534 PAQR9Q6ZVX9 377 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 DNAJB7Q7Z6W7 309 aaPredicted RBP17.37■□□□□ 0.37
USB1-206ENST00000562534 SCN4BQ8IWT1 228 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 FUKQ8N0W3 1084 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 TTC9BQ8N6N2 239 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 SLC2A14Q8TDB8 520 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 SHC3Q92529 594 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 SUSD6Q92537 303 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 SMARCD1Q96GM5 515 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 SPATA17Q96L03 361 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 C8orf48Q96LL4 319 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 NAA15Q9BXJ9 866 aaKnown RBP17.37■□□□□ 0.37
USB1-206ENST00000562534 FAM207AQ9NSI2 230 aaPredicted RBP17.37■□□□□ 0.37
USB1-206ENST00000562534 CEP72Q9P209 647 aa17.37■□□□□ 0.37
USB1-206ENST00000562534 USP15Q9Y4E8 981 aaPredicted RBP17.37■□□□□ 0.37
USB1-206ENST00000562534 FOXN3O00409 490 aaPredicted RBP17.36■□□□□ 0.37
USB1-206ENST00000562534 CLDN5O00501 218 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 CSH1P0DML2 217 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 CSH2P0DML3 217 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 ANXA13P27216 316 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 USP8P40818 1118 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 BPIFB4P59827 614 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 CBX2Q14781 532 aaPredicted RBP17.36■□□□□ 0.37
USB1-206ENST00000562534 DRAP1Q14919 205 aaPredicted RBP17.36■□□□□ 0.37
USB1-206ENST00000562534 DDR2Q16832 855 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 CCDC142Q17RM4 750 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 PPP1R26Q5T8A7 1209 aaPredicted RBP17.36■□□□□ 0.37
USB1-206ENST00000562534 CYP4A22Q5TCH4 519 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 LEMD2Q8NC56 503 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms