RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 ZWILCHQ9H900 591 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 DDX56Q9NY93 547 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF70Q9UC06 446 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 DGAT1O75907 488 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 MMP10P09238 476 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 RFC5P40937 340 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 GDF10P55107 478 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 CLDN10P78369 228 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 SMTNL2Q2TAL5 461 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF394Q53GI3 561 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 SLC30A9Q6PML9 568 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 RINLQ6ZS11 566 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ZC3H18Q86VM9 953 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF276Q8N554 614 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 PPFIBP2Q8ND30 876 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 UCMAQ8WVF2 138 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 PRR11Q96HE9 360 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 ZBTB45Q96K62 511 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 PDCD2LQ9BRP1 358 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 PPP1R12CQ9BZL4 782 aa14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 MTO1Q9Y2Z2 717 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 COL2A1P02458 1487 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-202ENST00000561976 C2orf71A6NGG8 1288 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 HARSP12081 509 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 CDK16Q00536 496 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 PIGHQ14442 188 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 DLGAP5Q15398 846 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 IRGCQ6NXR0 463 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 PDIK1LQ8N165 341 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SLC35B2Q8TB61 432 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 DCAKDQ8WVC6 231 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 FAM111AQ96PZ2 611 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 TMEM39BQ9GZU3 492 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 XPNPEP1Q9NQW7 623 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 FETUBQ9UGM5 382 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 LRCH1Q9Y2L9 728 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SNCAIPQ9Y6H5 919 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 AHCYL1O43865 530 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 CST8O60676 142 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 PSMG1O95456 288 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 NPTXRO95502 500 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 FESP07332 822 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 GNAT1P11488 350 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 BGNP21810 368 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SP100P23497 879 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SLC34A1Q06495 639 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 LRRC74BQ6ZQY2 392 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 NRG4Q8WWG1 115 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 GJD4Q96KN9 370 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 IMPG2Q9BZV3 1241 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SYNCQ9H7C4 482 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 ARHGAP28Q9P2N2 729 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 XPO7Q9UIA9 1087 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 SCOCQ9UIL1 159 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 CHMP2BQ9UQN3 213 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 ZNF541Q9H0D2 1346 aa14.65□□□□□ -0.06
VPS9D1-202ENST00000561976 THSD7AQ9UPZ6 1657 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 H0YCG3 227 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 RPL22P35268 128 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 BASP1P80723 227 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 NCOA4Q13772 614 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 MTERF2Q49AM1 385 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 ZC3H12AQ5D1E8 599 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 CYP4A22Q5TCH4 519 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 AP1ARQ63HQ0 302 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 RFX8Q6ZV50 586 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 SEPT12Q8IYM1 358 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 NAT8LQ8N9F0 302 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 MZB1Q8WU39 189 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 PXMP2Q9NR77 195 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 PAPOLBQ9NRJ5 636 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 ZNRF3Q9ULT6 936 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 IQANK1A0A1B0GTG1 560 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 TCRBV7S3A2A0A539 114 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 TBX10O75333 385 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 PTK7Q13308 1070 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 SEZ6Q53EL9 994 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 KCNT1Q5JUK3 1230 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 APLFQ8IW19 511 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 TMEM35BQ8NCS4 154 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 OR5B17Q8NGF7 314 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 WDR60Q8WVS4 1066 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 CYTH2Q99418 400 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 DHRS4Q9BTZ2 278 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 MSTO1Q9BUK6 570 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 TAS2R1Q9NYW7 299 aa14.64□□□□□ -0.07
VPS9D1-202ENST00000561976 DKC1O60832 514 aaKnown RBP eCLIP14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 INHBAP08476 426 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 MYL2P10916 166 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 PTPN7P35236 360 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 CPA2P48052 419 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 PAPOLAP51003 745 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 C11orf91Q3C1V1 193 aa14.63□□□□□ -0.07
VPS9D1-202ENST00000561976 TTC7BQ86TV6 843 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms