RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 CCNB3Q8WWL7 1395 aa4.51□□□□□ -1.69
LRRC28-218ENST00000560236 PTPN23Q9H3S7 1636 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 CCDC141Q6ZP82 1450 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 NALCNQ8IZF0 1738 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 TNS1Q9HBL0 1735 aaKnown RBP4.5□□□□□ -1.69
LRRC28-218ENST00000560236 CASKIN1Q8WXD9 1431 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 TARM1B6A8C7 271 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 F5H697 171 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 K7ESF4 209 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 TP73O15350 636 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 TRIAP1O43715 76 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 SGTAO43765 313 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 NDUFS2O75306 463 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 DRD4P21917 467 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 TUBA4AP68366 448 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 RAB39AQ14964 217 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 PLAC9Q5JTB6 97 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 RNF219Q5W0B1 726 aaPredicted RBP4.5□□□□□ -1.69
LRRC28-218ENST00000560236 C11orf87Q6NUJ2 197 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 RFKQ969G6 155 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 FKBP10Q96AY3 582 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 ADGRB3O60242 1522 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 PLEKHG1Q9ULL1 1385 aa4.5□□□□□ -1.69
LRRC28-218ENST00000560236 ARHGEF5Q12774 1597 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 DISP2A7MBM2 1401 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 RREB1Q92766 1687 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 TRIM75PA6NK02 468 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 POLRMTO00411 1230 aaKnown RBP4.49□□□□□ -1.69
LRRC28-218ENST00000560236 ANXA1P04083 346 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 ZFXP17010 805 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-218ENST00000560236 CNGA1P29973 690 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 SLC16A1P53985 500 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-218ENST00000560236 ETFDHQ16134 617 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 SLC30A10Q6XR72 485 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 POC1BQ8TC44 478 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
LRRC28-218ENST00000560236 CLPTM1LQ96KA5 538 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 MRGPRX4Q96LA9 322 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 BHMT2Q9H2M3 363 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 EHD3Q9NZN3 535 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-218ENST00000560236 SERGEFQ9UGK8 458 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 EHBP1L1Q8N3D4 1523 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 MTUS2Q5JR59 1369 aa4.49□□□□□ -1.69
LRRC28-218ENST00000560236 ADGRB2O60241 1585 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 SPATA31A3Q5VYP0 1347 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF521Q96K83 1311 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 GCC2Q8IWJ2 1684 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 MST1RQ04912 1400 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 TRPM2O94759 1503 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 E9PLN8 166 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 TSPY4P0CV99 314 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 TSPY10P0CW01 314 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 HSD3B2P26439 372 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 CERS1P27544 350 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 EPHB2P29323 1055 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 NDUFV1P49821 464 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 TLE1Q04724 770 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 ACAP2Q15057 778 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 SLC44A4Q53GD3 710 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 MORN5Q5VZ52 161 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 KRT27Q7Z3Y8 459 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 NEK8Q86SG6 692 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 ATL2Q8NHH9 583 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 OSBPL9Q96SU4 736 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 VKORC1Q9BQB6 163 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 SERTAD4Q9NUC0 356 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 CALCOCO1Q9P1Z2 691 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 TUBD1Q9UJT1 453 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 BTBD3Q9Y2F9 522 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.48□□□□□ -1.69
LRRC28-218ENST00000560236 PARD3Q8TEW0 1356 aa4.48□□□□□ -1.69
LRRC28-218ENST00000560236 NUP188Q5SRE5 1749 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 KCNAB3O43448 404 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 LATS1O95835 1130 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 NDUFB7P17568 137 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 MPGP29372 298 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 IL10RAQ13651 578 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 BMPR2Q13873 1038 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 TBCCQ15814 346 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 SLC9A4Q6AI14 798 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 PPP4R3AQ6IN85 833 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 CEP85Q6P2H3 762 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF66Q6ZN08 573 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-218ENST00000560236 YTHDF3Q7Z739 585 aaKnown RBP4.47□□□□□ -1.69
LRRC28-218ENST00000560236 UNC5CLQ8IV45 518 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 JADE3Q92613 823 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 SCAMP4Q969E2 229 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 ZNF48Q96MX3 618 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-218ENST00000560236 ACTRT3Q9BYD9 372 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 AMBRA1Q9C0C7 1298 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 SLC52A1Q9NWF4 448 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 DKK3Q9UBP4 350 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 LIMCH1Q9UPQ0 1083 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 TBC1D30Q9Y2I9 924 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms