RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 PABPC1LQ4VXU2 614 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 SGO2Q562F6 1265 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 CYP4A22Q5TCH4 519 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 ARHGAP17Q68EM7 881 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 SCARA3Q6AZY7 606 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 PHLDB3Q6NSJ2 640 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 SYCE2Q6PIF2 218 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 LUZP1Q86V48 1076 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 LRRTM3Q86VH5 581 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 CYFIP2Q96F07 1278 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 PCED1BQ96HM7 432 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 C8orf48Q96LL4 319 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 HEXIM2Q96MH2 286 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 CRACR2AQ9BSW2 395 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 NUP58Q9BVL2 599 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 GPR88Q9GZN0 384 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 SDCBP2Q9H190 292 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 S1PR5Q9H228 398 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 CRTAC1Q9NQ79 661 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 RTN4Q9NQC3 1192 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 ABI2Q9NYB9 513 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 CEP72Q9P209 647 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 HESX1Q9UBX0 185 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 MYO6Q9UM54 1294 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 NR2E1Q9Y466 385 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 YIPF1Q9Y548 306 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 PCDHB4Q9Y5E5 795 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 PATJQ8NI35 1801 aa12.81□□□□□ -0.36
RABGGTA-215ENST00000560207 MBTPS2O43462 519 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 OR4Q2P0C623 313 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 SPATA31D3P0C874 917 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 FAM200BP0CF97 657 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 UCHL3P15374 230 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 RAP1GAPP47736 663 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 RAD23BP54727 409 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 UBASH3AP57075 661 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 PTK2Q05397 1052 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 CBX2Q14781 532 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 SMAD2Q15796 467 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 MDH1BQ5I0G3 518 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 RARS2Q5T160 578 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 PTCRAQ6ISU1 281 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 TMEM270Q6UE05 265 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 SPATA31D4Q6ZUB0 917 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 ACOT1Q86TX2 421 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 UBR7Q8N806 425 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 ATAD1Q8NBU5 361 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 SHC3Q92529 594 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 SUSD6Q92537 303 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 PSMG2Q969U7 264 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 MYLPFQ96A32 169 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 PGLYRP2Q96PD5 576 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 SEPT5Q99719 369 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 MED10Q9BTT4 135 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 STK33Q9BYT3 514 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 WDR6Q9NNW5 1121 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 DMAP1Q9NPF5 467 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 DNAJC12Q9UKB3 198 aa12.8□□□□□ -0.36
RABGGTA-215ENST00000560207 GRXCR2A6NFK2 248 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 RTN3O95197 1032 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 SEC24AO95486 1093 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 ACO1P21399 889 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 GRIK1P39086 918 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 EPHA5P54756 1037 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 SNX16P57768 344 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 PSMC1P62191 440 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 FANCCQ00597 558 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 DLX2Q07687 328 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 KCNMA1Q12791 1236 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 TWF1Q12792 350 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 NR1I3Q14994 352 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 CNGA2Q16280 664 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 FIGNQ5HY92 759 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 RRAGAQ7L523 313 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 OTOP3Q7RTS5 596 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 APTXQ7Z2E3 356 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 SLC4A11Q8NBS3 891 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 WHAMMQ8TF30 809 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 ACSF2Q96CM8 615 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 TMEM209Q96SK2 561 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 NUCKS1Q9H1E3 243 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 ASAH2Q9NR71 780 aa12.79□□□□□ -0.36
RABGGTA-215ENST00000560207 H3BQ06 376 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ATP2C2O75185 946 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 LRRN2O75325 713 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 RFPL2O75678 378 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 KRT5P13647 590 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 PFKLP17858 780 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 BDNFP23560 247 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms