RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 MICAL2O94851 1124 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 GJB6O95452 261 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 KRT19P08727 400 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 IQCF3P0C7M6 154 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 TSHRP16473 764 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ARF4P18085 180 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 KDELR1P24390 212 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 RFC1P35251 1148 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 PCK1P35558 622 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SNX16P57768 344 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 OSTNP61366 133 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 FKBP1BP68106 108 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 IRX5P78411 483 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 IFI35P80217 286 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 CBLBQ13191 982 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 CCDC142Q17RM4 750 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 P3H1Q32P28 736 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SLC10A6Q3KNW5 377 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 DUSP28Q4G0W2 176 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF394Q53GI3 561 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ZFYVE27Q5T4F4 411 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 GKAP1Q5VSY0 366 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 DAB2IPQ5VWQ8 1189 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SCARA3Q6AZY7 606 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 IQSEC1Q6DN90 963 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 CHADLQ6NUI6 762 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 LCLAT1Q6UWP7 414 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ANKS1BQ7Z6G8 1248 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 CPLX4Q7Z7G2 160 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 PNMA8AQ86V59 439 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 EXOC3L1Q86VI1 746 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 TMEM192Q8IY95 271 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 OTUD6BQ8N6M0 293 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 CMASQ8NFW8 434 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 USP6NLQ92738 828 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ARHGEF2Q92974 986 aaKnown RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 HPDLQ96IR7 371 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SEC16BQ96JE7 1060 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ACAP3Q96P50 834 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF317Q96PQ6 595 aaPredicted RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 C16orf70Q9BSU1 422 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 DDX23Q9BUQ8 820 aaKnown RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ELOVL4Q9GZR5 314 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SMYD3Q9H7B4 428 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 UBN1Q9NPG3 1134 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 EURLQ9NYK6 297 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 SENP1Q9P0U3 644 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 NXF1Q9UBU9 619 aaKnown RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 FETUBQ9UGM5 382 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 CYTH4Q9UIA0 394 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 DNPEPQ9ULA0 475 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 TPX2Q9ULW0 747 aaKnown RBP8.51□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF148Q9UQR1 794 aa8.51□□□□□ -1.05
SMAD3-212ENST00000559937 A0A1B0GUA9 196 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ZNF487B1APH4 448 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 GOLGA8SH3BPF8 625 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 H3BRB1 525 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 APOC4-APOC2K7ER74 178 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 PDHXO00330 501 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 DPYSL4O14531 572 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 TSPAN1O60635 241 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ENDOD1O94919 500 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ACSL3O95573 720 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 APOC2P02655 101 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ERBB2P04626 1255 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 GJB1P08034 283 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 GHRP10912 638 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 KRT10P13645 584 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 TCF4P15884 667 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 AXLP30530 894 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 SCNN1AP37088 669 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 GPD2P43304 727 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 MAGEA4P43358 317 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 RAP1GAPP47736 663 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ARSEP51690 589 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 SLC18A1P54219 525 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 IGBP1P78318 339 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 MYO1EQ12965 1108 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 MKRN3Q13064 507 aaKnown RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 GRB14Q14449 540 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ITIH4Q14624 930 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 LLGL1Q15334 1064 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 GRIK4Q16099 956 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 KYNUQ16719 465 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 SKIDA1Q1XH10 827 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 ATP13A4Q4VNC1 1196 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 LACTB2Q53H82 288 aaPredicted RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 RNASEH2BQ5TBB1 312 aaKnown RBP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 CYP4A22Q5TCH4 519 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 CCDC121Q6ZUS5 278 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 CENPUQ71F23 418 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 LRRC52Q8N7C0 313 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 JOSD2Q8TAC2 188 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 TRPM7Q96QT4 1865 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 CPXM1Q96SM3 734 aa8.5□□□□□ -1.05
SMAD3-212ENST00000559937 RBM15Q96T37 977 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMAD3-212ENST00000559937 CNPY3Q9BT09 278 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms