RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 SRGAP2CP0DJJ0 459 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 SRGAP2BP0DMP2 458 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 RALAP11233 206 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 MAPK4P31152 587 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 RFC4P35249 363 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ETV4P43268 484 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TMED10P49755 219 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 MYBPC1Q00872 1141 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PFKPQ01813 784 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CREB5Q02930 508 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 KCNA1Q09470 495 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CETN1Q12798 172 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PTP4A2Q12974 167 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 KLF1Q13351 362 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 C16orf72Q14CZ0 275 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 NKX1-1Q15270 411 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CNGA3Q16281 694 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CLPPQ16740 277 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ZNF423Q2M1K9 1284 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 RC3H1Q5TC82 1133 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 THOC7Q6I9Y2 204 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PGM2L1Q6PCE3 622 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 IYDQ6PHW0 289 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TTC13Q8NBP0 860 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CATSPER1Q8NEC5 780 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 LMO3Q8TAP4 145 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 MZB1Q8WU39 189 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 NLRP4Q96MN2 994 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 C7orf26Q96N11 449 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PAFAH2Q99487 392 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 KLF6Q99612 283 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PRPF18Q99633 342 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 DHRS4Q9BTZ2 278 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PRDM16Q9HAZ2 1276 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ACP6Q9NPH0 428 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TBC1D23Q9NUY8 699 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TMOD2Q9NZR1 351 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 SELENONQ9NZV5 590 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 C6orf203Q9P0P8 240 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CROTQ9UKG9 612 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 FAM32AQ9Y421 112 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 HEY1Q9Y5J3 304 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PRR5-ARHGAP8B1AHC4 643 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 RSPH10B2B2RC85 870 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ERVV-1B6SEH8 477 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 IPO5O00410 1097 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CRTAMO95727 393 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 SERPINA6P08185 405 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 C6orf222P0C671 652 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 RSPH10BP0C881 870 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 COL6A2P12110 1019 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ZNF12P17014 697 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 AOC1P19801 751 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ENTPD1P49961 510 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ARHGAP8P85298 464 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TGFBIQ15582 683 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CCDC153Q494R4 210 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 HSF5Q4G112 596 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ATG16L1Q676U5 607 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PTF1AQ7RTS3 328 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 NANOGNBQ7Z5D8 188 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TRIM50Q86XT4 487 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 ZNF34Q8IZ26 560 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 TRPC4APQ8TEL6 797 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CASP10Q92851 521 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 FAM111AQ96PZ2 611 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 OLFML3Q9NRN5 406 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 CNTN3Q9P232 1028 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 NOCTQ9UK39 431 aaKnown RBP6.95□□□□□ -1.3
ZEB1-217ENST00000559858 APPL1Q9UKG1 709 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 PPME1Q9Y570 386 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 AP4B1Q9Y6B7 739 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 NFASCO94856 1347 aa6.95□□□□□ -1.3
ZEB1-217ENST00000559858 KIAA1551Q9HCM1 1747 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 FUOMA2VDF0 154 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 E5RJQ4 531 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 POLR2MP0CAP2 368 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 GSTT2P0CG29 244 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 GSTT2BP0CG30 244 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 PHKA2P46019 1235 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 STT3AP46977 705 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 HSPA13P48723 471 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 BCAP31P51572 246 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 EPHB1P54762 984 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 ALDH18A1P54886 795 aaKnown RBP6.94□□□□□ -1.3
ZEB1-217ENST00000559858 GPX6P59796 221 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 PSMC6P62333 389 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 SLC25A3Q00325 362 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 SLC18A2Q05940 514 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 GPS1Q13098 491 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 ITGA7Q13683 1181 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 PPP1R18Q6NYC8 613 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 C3orf67Q6ZVT6 689 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 CATSPER3Q86XQ3 398 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 ARHGEF19Q8IW93 802 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 EPS8L1Q8TE68 723 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 DCAKDQ8WVC6 231 aa6.94□□□□□ -1.3
ZEB1-217ENST00000559858 APOPT1Q96IL0 206 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms