RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TNFRSF10AO00220 468 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 RFPL2O75678 378 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 ABLIM3O94929 683 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 C8AP07357 584 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 PBX1P40424 430 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 ZNF75DP51815 510 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 GOLGA8FQ08AF8 430 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 GOLGA8DPQ0D2H9 430 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 UVSSAQ2YD98 709 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 PPP1R26Q5T8A7 1209 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 SCN4BQ8IWT1 228 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 GPR65Q8IYL9 337 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 SLC22A17Q8WUG5 538 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 ATXN2LQ8WWM7 1075 aaKnown RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 SHC3Q92529 594 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 CYFIP2Q96F07 1278 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 NAA15Q9BXJ9 866 aaKnown RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 OXCT2Q9BYC2 517 aaPredicted RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 GPR88Q9GZN0 384 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 CEP72Q9P209 647 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 FBXW11Q9UKB1 542 aa13.21□□□□□ -0.29
GABPB1-208ENST00000558970 ZNF638Q14966 1978 aaKnown RBP13.21□□□□□ -0.29
GABPB1-208ENST00000558970 OBSL1O75147 1896 aa13.21□□□□□ -0.3
GABPB1-208ENST00000558970 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 CCL16O15467 120 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 THAP12O43422 761 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TBX10O75333 385 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 ATF2P15336 505 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 POU3F3P20264 500 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-208ENST00000558970 RFX1P22670 979 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 GNA15P30679 374 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 CLCN1P35523 988 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 GRIK1P39086 918 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 CACNA2D1P54289 1103 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TWF1Q12792 350 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 IFRD2Q12894 506 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-208ENST00000558970 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-208ENST00000558970 GOLGA7BQ2TAP0 167 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 SGO2Q562F6 1265 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 PPM1LQ5SGD2 360 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 RARS2Q5T160 578 aaKnown RBP13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TPGS2Q68CL5 300 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 FAM171BQ6P995 826 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 LILRA6Q6PI73 481 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TMC5Q6UXY8 1006 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 C4orf50Q6ZRC1 276 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 FAM35AQ86V20 835 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 EFHBQ8N7U6 833 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 GIPC2Q8TF65 315 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 TFAP2BQ92481 460 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 FAXDC2Q96IV6 333 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 CDCA3Q99618 268 aaPredicted RBP13.2□□□□□ -0.3
GABPB1-208ENST00000558970 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 DNAI2Q9GZS0 605 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 GRPEL1Q9HAV7 217 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 CDH22Q9UJ99 828 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 YIPF1Q9Y548 306 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 INSL5Q9Y5Q6 135 aa13.2□□□□□ -0.3
GABPB1-208ENST00000558970 ATP8B3O60423 1300 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 H3BQ06 376 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-208ENST00000558970 M0QYV0 167 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 AP1G2O75843 785 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 ADCY5O95622 1261 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 LRG1P02750 347 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 CASP14P31944 242 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 SOX5P35711 763 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 STAT1P42224 750 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 ZNF132P52740 706 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 JAM2P57087 298 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 ADAM15Q13444 863 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
GABPB1-208ENST00000558970 DDR2Q16832 855 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 SPECC1LQ69YQ0 1117 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 PASD1Q8IV76 773 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 CRYBG2Q8N1P7 616 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 UBA3Q8TBC4 463 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 SPPL2BQ8TCT7 592 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 CASP10Q92851 521 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 ZSWIM1Q9BR11 485 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 TMEM30AQ9NV96 361 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 TSPAN16Q9UKR8 245 aa13.19□□□□□ -0.3
GABPB1-208ENST00000558970 XIRP2A4UGR9 3374 aa13.18□□□□□ -0.3
GABPB1-208ENST00000558970 C5orf42Q9H799 3197 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms