RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SCAMP3O14828 347 aaKnown RBP12.9□□□□□ -0.34
SMAD3-206ENST00000558739 MED24O75448 989 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 ALDH1A2O94788 518 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
SMAD3-206ENST00000558739 TIE1P35590 1138 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 ZNF33AQ06730 810 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 DMP1Q13316 513 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-206ENST00000558739 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 SDHAF4Q5VUM1 108 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 GLRX5Q86SX6 157 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 USP37Q86T82 979 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 ATP2A3Q93084 1043 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 ZBTB45Q96K62 511 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-206ENST00000558739 HSPA12BQ96MM6 686 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.34
SMAD3-206ENST00000558739 CLMPQ9H6B4 373 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 KIF9Q9HAQ2 790 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 CENPEQ02224 2701 aa12.9□□□□□ -0.34
SMAD3-206ENST00000558739 AHCTF1Q8WYP5 2266 aa12.9□□□□□ -0.35
SMAD3-206ENST00000558739 NBASA2RRP1 2371 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-206ENST00000558739 DKK1O94907 266 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 CXCL8P10145 99 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 EIF2S3P41091 472 aaKnown RBP12.89□□□□□ -0.35
SMAD3-206ENST00000558739 IFNAR2P48551 515 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 CLDN6P56747 220 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 CFHR1Q03591 330 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMAD3-206ENST00000558739 SLC14A1Q13336 389 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 MYBPC2Q14324 1141 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 TAF12Q16514 161 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 SPDYCQ5MJ68 293 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 LMBRD2Q68DH5 695 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-206ENST00000558739 MON1AQ86VX9 555 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 C12orf40Q86WS4 652 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 BAHD1Q8TBE0 780 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-206ENST00000558739 PNMA5Q96PV4 448 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 SEMA4CQ9C0C4 833 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-206ENST00000558739 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 TRPC7Q9HCX4 862 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 CALCOCO1Q9P1Z2 691 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
SMAD3-206ENST00000558739 AP5Z1O43299 807 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 KRT10P13645 584 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 CYP11B2P19099 503 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 PROZP22891 400 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 DPP6P42658 865 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 SLC6A11P48066 632 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 EFNA5P52803 228 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 SSRP1Q08945 709 aaKnown RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 ZNF268Q14587 947 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 LRRTM3Q86VH5 581 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 TRIML1Q8N9V2 468 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 SETD7Q8WTS6 366 aaKnown RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 LARP6Q9BRS8 491 aaKnown RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 MAGED2Q9UNF1 606 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 BTBD3Q9Y2F9 522 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
SMAD3-206ENST00000558739 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
SMAD3-206ENST00000558739 IGHV1OR15-9A0A0B4J2B8 117 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 PLK4O00444 970 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 DEXIO95424 95 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 SYPP08247 313 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 GABRG2P18507 467 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 MAOBP27338 520 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 TXKP42681 527 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 KIR2DL1P43626 348 aaPredicted RBP12.87□□□□□ -0.35
SMAD3-206ENST00000558739 ZXDBP98169 803 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 KDSRQ06136 332 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 NR5A1Q13285 461 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 CALCRLQ16602 461 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 GALNT17Q6IS24 598 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 DSTYKQ6XUX3 929 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 MRPS31Q92665 395 aaKnown RBP12.87□□□□□ -0.35
SMAD3-206ENST00000558739 EXOC4Q96A65 974 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 ZCWPW1Q9H0M4 648 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 TMEM131Q92545 1883 aa12.87□□□□□ -0.35
SMAD3-206ENST00000558739 DOPEY1Q5JWR5 2465 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 TCHHQ07283 1943 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 CREBBPQ92793 2442 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 A0A1W2PQD8 194 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 C2orf78A6NCI8 922 aa12.86□□□□□ -0.35
SMAD3-206ENST00000558739 K7ERI5 159 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms