RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 HUS1O60921 280 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 CXCL14O95715 111 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 IGFBP4P22692 258 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 MSX1P28360 303 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 ATICP31939 592 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 IRS1P35568 1242 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 USP41Q3LFD5 358 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 PRSS55Q6UWB4 352 aaPredicted RBP12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 SCG3Q8WXD2 468 aaKnown RBP12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 TCF25Q9BQ70 676 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 PCDHGC5Q9Y5F6 944 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
HMGB1P8-201ENST00000558211 COL4A4P53420 1690 aaPredicted RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 M0QZQ0 153 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 P4HA2O15460 535 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 LPXNO60711 386 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 URODP06132 367 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 ODC1P11926 461 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 SLC9A1P19634 815 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 RAP1GAPP47736 663 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 GLUD2P49448 558 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 FANCCQ00597 558 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 UBXN1Q04323 297 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 UBE3AQ05086 875 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 RTP2Q5QGT7 225 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 FKBP15Q5T1M5 1219 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 METTL23Q86XA0 190 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 GLYCTKQ8IVS8 523 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 INTS2Q9H0H0 1204 aaKnown RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 ZBP1Q9H171 429 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 APOBEC3GQ9HC16 384 aaKnown RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 ZDHHC3Q9NYG2 299 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 GCNT4Q9P109 453 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 L1RE1Q9UN81 338 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 LZTS1Q9Y250 596 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 COQ4Q9Y3A0 265 aa12.86□□□□□ -0.35
HMGB1P8-201ENST00000558211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 SERTM1A2A2V5 107 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 SYN3O14994 580 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 EFEMP2O95967 443 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 THBS1P07996 1170 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 CTSAP10619 480 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 P4HA1P13674 534 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 RPL17P18621 184 aaKnown RBP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 FGFR3P22607 806 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 PAX3P23760 479 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 FXR1P51114 621 aaKnown RBP eCLIP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 CDH8P55286 799 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 ARPP19P56211 112 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 CAMK1Q14012 370 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 PTPROQ16827 1216 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 SOWAHAQ2M3V2 549 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 OVOS1Q6IE37 1185 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 TREML4Q6UXN2 200 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 RNF168Q8IYW5 571 aaPredicted RBP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 DEFB123Q8N688 67 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 C1orf216Q8TAB5 229 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 TAF4BQ92750 862 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 NT5C1BQ96P26 610 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 SMYD3Q9H7B4 428 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 GDAP2Q9NXN4 497 aa12.85□□□□□ -0.35
HMGB1P8-201ENST00000558211 LRRC10BA6NIK2 292 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 HIDE1A8MVS5 230 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 PMM2O15305 246 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 TEX33O43247 280 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 PDGFRBP09619 1106 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 WEE2P0C1S8 567 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 CD58P19256 250 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 TYMPP19971 482 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 KLK7P49862 253 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 CDR1P51861 262 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 UBASH3AP57075 661 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 APBA1Q02410 837 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 DSG1Q02413 1049 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 KCNMA1Q12791 1236 aa12.84□□□□□ -0.35
HMGB1P8-201ENST00000558211 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms