RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 TPGS2Q68CL5 300 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 TMC6Q7Z403 805 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 PPFIBP1Q86W92 1011 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 SPATA2LQ8IUW3 424 aaPredicted RBP16.24■□□□□ 0.19
NEDD1-213ENST00000557644 KREMEN2Q8NCW0 462 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 MRFAP1L1Q96HT8 127 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 MAN1C1Q9NR34 630 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 TMEM30AQ9NV96 361 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 FBXW11Q9UKB1 542 aa16.24■□□□□ 0.19
NEDD1-213ENST00000557644 LRRC53A6NM62 1247 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 PAEPP09466 180 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 ADORA2BP29275 332 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 SOX5P35711 763 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 ARID5AQ03989 594 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 MAPRE1Q15691 268 aaKnown RBP16.23■□□□□ 0.19
NEDD1-213ENST00000557644 NFE2Q16621 373 aaPredicted RBP16.23■□□□□ 0.19
NEDD1-213ENST00000557644 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 CDCA3Q99618 268 aaPredicted RBP16.23■□□□□ 0.19
NEDD1-213ENST00000557644 NUP58Q9BVL2 599 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 PCDHB5Q9Y5E4 795 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 CASP14P31944 242 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 GOLGA8FQ08AF8 430 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 GOLGA8DPQ0D2H9 430 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 E4F1Q66K89 784 aaPredicted RBP16.23■□□□□ 0.19
NEDD1-213ENST00000557644 EFHBQ8N7U6 833 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 SLC7A14Q8TBB6 771 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 SEPT5Q99719 369 aaPredicted RBP16.23■□□□□ 0.19
NEDD1-213ENST00000557644 MED10Q9BTT4 135 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 DAAM1Q9Y4D1 1078 aa16.23■□□□□ 0.19
NEDD1-213ENST00000557644 UNC80Q8N2C7 3258 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 PRRG1O14668 218 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 RFPL2O75678 378 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 GNA15P30679 374 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 STAT1P42224 750 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 GPR15P49685 360 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 MGAT5BQ3V5L5 792 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 CFAP221Q4G0U5 840 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 SGO2Q562F6 1265 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 C4orf50Q6ZRC1 276 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 FAM35AQ86V20 835 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 CAPN11Q9UMQ6 739 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.22■□□□□ 0.19
NEDD1-213ENST00000557644 C8AP07357 584 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 CFHP08603 1231 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 VDRP11473 427 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 ELF1P32519 619 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 DLX2Q07687 328 aaPredicted RBP16.22■□□□□ 0.19
NEDD1-213ENST00000557644 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 SDHAF4Q5VUM1 108 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 EP400NLQ6ZTU2 488 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 TCEAL8Q8IYN2 117 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 STKLD1Q8NE28 680 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 SPPL2BQ8TCT7 592 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 HNRNPABQ99729 332 aaKnown RBP16.22■□□□□ 0.19
NEDD1-213ENST00000557644 BRWD1Q9NSI6 2320 aa16.22■□□□□ 0.19
NEDD1-213ENST00000557644 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 O00370 1275 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 BEST1O76090 585 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 ADAM15Q13444 863 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 GSE1Q14687 1217 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 DDR2Q16832 855 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 C12orf76Q8N812 135 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-213ENST00000557644 GPR152Q8TDT2 470 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 C2orf15Q8WU43 125 aaKnown RBP16.21■□□□□ 0.19
NEDD1-213ENST00000557644 ZNF606Q8WXB4 792 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 FUBP3Q96I24 572 aaKnown RBP eCLIP16.21■□□□□ 0.19
NEDD1-213ENST00000557644 KCNK16Q96T55 309 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 CLDND1Q9NY35 253 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 TSPAN16Q9UKR8 245 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 THAP12O43422 761 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 HAPLN1P10915 354 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-213ENST00000557644 CYP11B1P15538 503 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 PTK2Q05397 1052 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 CTC1Q2NKJ3 1217 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 GOLGA7BQ2TAP0 167 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 EDEM3Q9BZQ6 932 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 ABCB6Q9NP58 842 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 LUC7L2Q9Y383 392 aaKnown RBP16.21■□□□□ 0.19
NEDD1-213ENST00000557644 YIPF1Q9Y548 306 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 INSL5Q9Y5Q6 135 aa16.21■□□□□ 0.19
NEDD1-213ENST00000557644 TBX10O75333 385 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 AP1G2O75843 785 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 TBX2Q13207 712 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-213ENST00000557644 LIN9Q5TKA1 542 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 NOP9Q86U38 636 aaKnown RBP16.2■□□□□ 0.18
NEDD1-213ENST00000557644 TTC30AQ86WT1 665 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 SCN4BQ8IWT1 228 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 UBA3Q8TBC4 463 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 EPS8L1Q8TE68 723 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 APOL5Q9BWW9 433 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 DNAI2Q9GZS0 605 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 PLEKHA4Q9H4M7 779 aa16.2■□□□□ 0.18
NEDD1-213ENST00000557644 KIAA1257Q9ULG3 409 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms