RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CCDC33Q8N5R6 958 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 SLC32A1Q9H598 525 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
PSEN1-221ENST00000557293 MMP17Q9ULZ9 603 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 ITPR1Q14643 2758 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 A0A0B4J269 797 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 OGTO15294 1046 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 PIGRP01833 764 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 NFICP08651 508 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 MAPK8P45983 427 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 LMAN2Q12907 356 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 SAFBQ15424 915 aaKnown RBP eCLIP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 PEAR1Q5VY43 1037 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 SYT12Q8IV01 421 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 TMEFF1Q8IYR6 380 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 MYRFLQ96LU7 910 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 PNMA5Q96PV4 448 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 TIPINQ9BVW5 301 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 RPF1Q9H9Y2 349 aaKnown RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 FSCN3Q9NQT6 498 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 ABI2Q9NYB9 513 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-221ENST00000557293 PI4KAP42356 2102 aa13.55□□□□□ -0.24
PSEN1-221ENST00000557293 NOL4O94818 638 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 CSH1P0DML2 217 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 CSH2P0DML3 217 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 CD59P13987 128 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.24
PSEN1-221ENST00000557293 SMTNP53814 917 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 SEC13P55735 322 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 KYAT1Q16773 422 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 DDR2Q16832 855 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 MAP7D1Q3KQU3 841 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 EMC10Q5UCC4 262 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 SCARA3Q6AZY7 606 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 PDZD3Q86UT5 571 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 CD302Q8IX05 232 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 THEM5Q8N1Q8 247 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-221ENST00000557293 ATP2A3Q93084 1043 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 EXOC4Q96A65 974 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 BBC3Q96PG8 261 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-221ENST00000557293 PKMYT1Q99640 499 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 PI4K2AQ9BTU6 479 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 NUSAP1Q9BXS6 441 aaKnown RBP13.54□□□□□ -0.24
PSEN1-221ENST00000557293 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 PILRBQ9UKJ0 227 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 DSEQ9UL01 958 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 PCDHB5Q9Y5E4 795 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 STK24Q9Y6E0 443 aa13.54□□□□□ -0.24
PSEN1-221ENST00000557293 SGK1O00141 431 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 PRPF40AO75400 957 aaKnown RBP13.53□□□□□ -0.24
PSEN1-221ENST00000557293 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 TCF3P15923 654 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 IFNAR2P48551 515 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 SLC12A3P55017 1021 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 SCAPQ12770 1279 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 HYIQ5T013 277 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 ARMCX6Q7L4S7 300 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 LPCAT2Q7L5N7 544 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 METTL23Q86XA0 190 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 DCP1BQ8IZD4 617 aaKnown RBP13.53□□□□□ -0.24
PSEN1-221ENST00000557293 ARL14EPQ8N8R7 260 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-221ENST00000557293 IL17RCQ8NAC3 791 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 SH3RF2Q8TEC5 729 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 TRMT2BQ96GJ1 504 aaKnown RBP13.53□□□□□ -0.24
PSEN1-221ENST00000557293 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
PSEN1-221ENST00000557293 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 DERAQ9Y315 318 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 PCDHB6Q9Y5E3 794 aa13.53□□□□□ -0.24
PSEN1-221ENST00000557293 ADAMTS9Q9P2N4 1935 aa13.52□□□□□ -0.24
PSEN1-221ENST00000557293 A0A0A0MRY4 1105 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 ANKRD63C9JTQ0 380 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 H0Y626 953 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 TRIM16O95361 564 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 ZIC2O95409 532 aaPredicted RBP13.52□□□□□ -0.25
PSEN1-221ENST00000557293 ITPKAP23677 461 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 CYP2F1P24903 491 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 SLC6A11P48066 632 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 TAF6P49848 677 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 MRPS21P82921 87 aaKnown RBP13.52□□□□□ -0.25
PSEN1-221ENST00000557293 NR1H3Q13133 447 aa13.52□□□□□ -0.25
PSEN1-221ENST00000557293 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 401.2 ms