RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CCINQ13939 588 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 CFAP221Q4G0U5 840 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 CNNM4Q6P4Q7 775 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 FAM171BQ6P995 826 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 CBWD2Q8IUF1 395 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 OR5B17Q8NGF7 314 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 DHX58Q96C10 678 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 TRMT2BQ96GJ1 504 aaKnown RBP17.04■□□□□ 0.32
TUBB3-213ENST00000557262 FUBP3Q96I24 572 aaKnown RBP eCLIP17.04■□□□□ 0.32
TUBB3-213ENST00000557262 HPDLQ96IR7 371 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 GMEB2Q9UKD1 530 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 CCL26Q9Y258 94 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 CHURC1-FNTBB4DL54 471 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 K7ESF4 209 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 PDIA4P13667 645 aaKnown RBP17.03■□□□□ 0.32
TUBB3-213ENST00000557262 SDHBP21912 280 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 CNR2P34972 360 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 FNTBP49356 437 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 ASIC1P78348 528 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 ZNF268Q14587 947 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-213ENST00000557262 RSPO4Q2I0M5 234 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-213ENST00000557262 CC2D1AQ6P1N0 951 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-213ENST00000557262 SHC4Q6S5L8 630 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 Q6ZS52 159 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 EPM2AIP1Q7L775 607 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-213ENST00000557262 LIMS2Q7Z4I7 341 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 STKLD1Q8NE28 680 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 C7orf25Q9BPX7 421 aa17.03■□□□□ 0.32
TUBB3-213ENST00000557262 MAGEC2Q9UBF1 373 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-213ENST00000557262 CEP250Q9BV73 2442 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 PTPRJQ12913 1337 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 CACNA1AO00555 2505 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 DNAH14Q0VDD8 3507 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 HRO43593 1189 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 HCRTO43612 131 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 ATP2C2O75185 946 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 TGM1P22735 817 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 LMO2P25791 158 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 HOXA6P31267 233 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 MAGEA11P43364 429 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 SNRPFP62306 86 aaKnown RBP17.02■□□□□ 0.32
TUBB3-213ENST00000557262 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 AMPD2Q01433 879 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 SIM2Q14190 667 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-213ENST00000557262 FAM26FQ5R3K3 315 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 LAIR1Q6GTX8 287 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 C4orf50Q6ZRC1 276 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 LONP2Q86WA8 852 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 WDR49Q8IV35 697 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 SCN4BQ8IWT1 228 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 RDH13Q8NBN7 331 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 SNX21Q969T3 373 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 EBF3Q9H4W6 596 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 HPS4Q9NQG7 708 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
TUBB3-213ENST00000557262 OTOL1A6NHN0 477 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-213ENST00000557262 TRDMT1O14717 391 aaKnown RBP17.01■□□□□ 0.31
TUBB3-213ENST00000557262 TGFB1I1O43294 461 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 USP17L7P0C7H9 530 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 WARSP23381 471 aaKnown RBP17.01■□□□□ 0.31
TUBB3-213ENST00000557262 DMWDQ09019 674 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 GRSF1Q12849 480 aaKnown RBP eCLIP17.01■□□□□ 0.31
TUBB3-213ENST00000557262 PDGFRLQ15198 375 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
TUBB3-213ENST00000557262 LPAL2Q16609 132 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 CCDC142Q17RM4 750 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 TMEM196Q5HYL7 178 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 PRR23BQ6ZRT6 265 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 UNC13DQ70J99 1090 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 TRAPPC11Q7Z392 1133 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 KBTBD7Q8WVZ9 684 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 CYP2S1Q96SQ9 504 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 SYT15Q9BQS2 421 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 C2orf42Q9NWW7 574 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
TUBB3-213ENST00000557262 CLIC2O15247 247 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 POLR2DO15514 142 aaKnown RBP17■□□□□ 0.31
TUBB3-213ENST00000557262 TADA3O75528 432 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
TUBB3-213ENST00000557262 RETP07949 1114 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 PDGFRBP09619 1106 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 FAM163BP0C2L3 166 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 TNNI1P19237 187 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 LMNB2Q03252 620 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 FAM160A1Q05DH4 1040 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 SNRNP35Q16560 246 aaKnown RBP17■□□□□ 0.31
TUBB3-213ENST00000557262 FOXD4L5Q5VV16 416 aaPredicted RBP17■□□□□ 0.31
TUBB3-213ENST00000557262 HEATR6Q6AI08 1181 aaKnown RBP17■□□□□ 0.31
TUBB3-213ENST00000557262 VSTM1Q6UX27 236 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 FOXD4L4Q8WXT5 416 aaPredicted RBP17■□□□□ 0.31
TUBB3-213ENST00000557262 SPATA17Q96L03 361 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 CEP295NLQ96MC4 621 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 FNBP1Q96RU3 617 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 MMS19Q96T76 1030 aa17■□□□□ 0.31
TUBB3-213ENST00000557262 MAGEF1Q9HAY2 307 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms