RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 CCDC91Q7Z6B0 441 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 SRLQ86TD4 932 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 RPAINQ86UA6 219 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 RPAP2Q8IXW5 612 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 C10orf67Q8IYJ2 551 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 DCBLD1Q8N8Z6 715 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 CCDC191Q8NCU4 936 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 NAF1Q96HR8 494 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 MRI1Q9BV20 369 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 SLC13A1Q9BZW2 595 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 TRIM5Q9C035 493 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 LANCL2Q9NS86 450 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 POLKQ9UBT6 870 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 TESQ9UGI8 421 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ZNF215Q9UL58 517 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 CEP83Q9Y592 693 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 MRFAP1Q9Y605 127 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 LRRFIP2Q9Y608 721 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 ARHGEF28Q8N1W1 1705 aaKnown RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 MAGI1Q96QZ7 1491 aaPredicted RBP4.28□□□□□ -1.72
FOXN3-213ENST00000556916 NSD3Q9BZ95 1437 aa4.28□□□□□ -1.72
FOXN3-213ENST00000556916 GLI2P10070 1586 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 FRMPD1Q5SYB0 1578 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SPAG9O60271 1321 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 PLEKHD1A6NEE1 506 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 AP5Z1O43299 807 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 CCP110O43303 1012 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ALDH1L1O75891 902 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ENDOD1O94919 500 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 FOSP01100 380 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 PNMA6AP0CW24 399 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 FDXRP22570 491 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SLC6A2P23975 617 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 TMPOP42166 694 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 MAGEA9P43362 315 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 MTHFSP49914 203 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 NEK2P51955 445 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 CLRN1P58418 232 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ATP8B2P98198 1209 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SCAPQ12770 1279 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 MTM1Q13496 603 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ELF2Q15723 593 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 UAP1L1Q3KQV9 507 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SP5Q6BEB4 398 aaPredicted RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ARMC6Q6NXE6 501 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 LEKR1Q6ZMV7 388 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 UBE3BQ7Z3V4 1068 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 GLCCI1Q86VQ1 547 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 PLA2G4DQ86XP0 818 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SUGP1Q8IWZ8 645 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 RHOT2Q8IXI1 618 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 FAM98AQ8NCA5 519 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 TDRD7Q8NHU6 1098 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 TSR2Q969E8 191 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 EXOC4Q96A65 974 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 HOOK2Q96ED9 719 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 DMRTA2Q96SC8 542 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 C7orf25Q9BPX7 421 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ZSWIM1Q9BR11 485 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SPATA5L1Q9BVQ7 753 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 API5Q9BZZ5 524 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 FBXO34Q9NWN3 711 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 TLK1Q9UKI8 766 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 CNPY2Q9Y2B0 182 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 LUC7L2Q9Y383 392 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 RRP15Q9Y3B9 282 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 JRKLQ9Y4A0 524 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 PCDHB1Q9Y5F3 818 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 LAMA4Q16363 1823 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 SETD1BQ9UPS6 1966 aaKnown RBP4.27□□□□□ -1.73
FOXN3-213ENST00000556916 VWDEQ8N2E2 1590 aa4.27□□□□□ -1.73
FOXN3-213ENST00000556916 ABCC4O15439 1325 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 FANCAO15360 1455 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 ZCCHC11Q5TAX3 1644 aaKnown RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 TCRBV7S2A1N4TA0A589 114 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CCDC78A2IDD5 438 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 LRRC14BA6NHZ5 514 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 DRGXA6NNA5 263 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 PJA2O43164 708 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 STX6O43752 255 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 GPR32O75388 356 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 C1RP00736 705 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 ELANEP08246 267 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 SBK3P0C264 359 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 U2AF1L5P0DN76 240 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CDK4P11802 303 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 DDCP20711 480 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 CALRP27797 417 aaKnown RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 ACTN2P35609 894 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 MPLP40238 635 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 WASP42768 502 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 ZNF280AP59817 542 aaPredicted RBP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 KRT85P78386 507 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 U2AF1Q01081 240 aaKnown RBP eCLIP4.26□□□□□ -1.73
FOXN3-213ENST00000556916 MCL1Q07820 350 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 SP140Q13342 867 aa4.26□□□□□ -1.73
FOXN3-213ENST00000556916 TTF1Q15361 905 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms