RNA–Protein interactions for RNA: ENST00000556838.5

RBM23-223, Transcript of RNA binding motif protein 23, human

TSL 2

Gene RBM23, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-223	ENST00000556838	ATF6	P18850	670 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	CCR2	P41597	374 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	MRE11	P49959	708 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	CDH8	P55286	799 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	NOP14	P78316	857 aa	Known RBP	13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	CYP27A1	Q02318	531 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	CCDC40	Q4G0X9	1142 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	MDH1B	Q5I0G3	518 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	WDR44	Q5JSH3	913 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	PARM1	Q6UWI2	310 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	SCARA5	Q6ZMJ2	495 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	UNC93A	Q86WB7	457 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	SCN4B	Q8IWT1	228 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	MLKL	Q8NB16	471 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	B3GALNT2	Q8NCR0	500 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	FBXL13	Q8NEE6	735 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	SHKBP1	Q8TBC3	707 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	TAS1R2	Q8TE23	839 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	RSAD2	Q8WXG1	361 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	MYLPF	Q96A32	169 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	PHOX2B	Q99453	314 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	DUSP9	Q99956	384 aa	Known RBP	13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	LRRC3	Q9BY71	257 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	NIF3L1	Q9GZT8	377 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	NUP62CL	Q9H1M0	184 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	ATXN3L	Q9H3M9	355 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	SLITRK6	Q9H5Y7	841 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	CRTAC1	Q9NQ79	661 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	RAB20	Q9NX57	234 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	EHD2	Q9NZN4	543 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	UXT	Q9UBK9	157 aa	Predicted RBP	13.2	□□□□□ -0.3
RBM23-223	ENST00000556838	ZMYM5	Q9UJ78	669 aa		13.2	□□□□□ -0.3
RBM23-223	ENST00000556838		A0A1W2PRU2	124 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	TRIM66	O15016	1216 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	MOSPD3	O75425	235 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	BDNF	P23560	247 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	ANXA13	P27216	316 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	GABRR2	P28476	465 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	GRIK1	P39086	918 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	CDR1	P51861	262 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	CETN1	Q12798	172 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	TEAD2	Q15562	447 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	DDR2	Q16832	855 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	TTC39C	Q8N584	583 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	PRSS33	Q8NF86	280 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	FGF14	Q92915	247 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	SMARCD2	Q92925	531 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	E2F7	Q96AV8	911 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	ELSPBP1	Q96BH3	223 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	ASIC4	Q96FT7	647 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	PCED1B	Q96HM7	432 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	SPATA17	Q96L03	361 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	BCO2	Q9BYV7	579 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	ELOVL4	Q9GZR5	314 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	SMOC2	Q9H3U7	446 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	TRPV4	Q9HBA0	871 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	ZFP14	Q9HCL3	533 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	RWDD2A	Q9UIY3	292 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	FBXL21	Q9UKT6	434 aa		13.19	□□□□□ -0.3
RBM23-223	ENST00000556838	USP34	Q70CQ2	3546 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SOBP	A7XYQ1	873 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	NOL4	O94818	638 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	PDGFB	P01127	241 aa	Predicted RBP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	GJA1	P17302	382 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	DDX6	P26196	483 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	ASPA	P45381	313 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	RAP1GAP	P47736	663 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	VCP	P55072	806 aa	Known RBP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	STX17	P56962	302 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	PFKP	Q01813	784 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	FAM78A	Q5JUQ0	283 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SPOPL	Q6IQ16	392 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	GAREM2	Q75VX8	874 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SUGP1	Q8IWZ8	645 aa	Known RBP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	GPR152	Q8TDT2	470 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SLC35C1	Q96A29	364 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	TRMT2B	Q96GJ1	504 aa	Known RBP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	ASB16	Q96NS5	453 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SDCBP2	Q9H190	292 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	DPEP3	Q9H4B8	488 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	ZNF334	Q9HCZ1	680 aa	Predicted RBP	13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SLC2A4RG	Q9NR83	387 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	WNT16	Q9UBV4	365 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	DACH1	Q9UI36	760 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	COQ4	Q9Y3A0	265 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	NME7	Q9Y5B8	376 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	ZNF318	Q5VUA4	2279 aa		13.18	□□□□□ -0.3
RBM23-223	ENST00000556838	SLC38A8	A6NNN8	435 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	PMM2	O15305	246 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	P4HA2	O15460	535 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	CCDC192	P0DO97	292 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	HMGA1	P17096	107 aa	Known RBP	13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	WEE1	P30291	646 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	GPR15	P49685	360 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	NDST1	P52848	882 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	INCA1	Q0VD86	236 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	CBWD6	Q4V339	395 aa		13.17	□□□□□ -0.3
RBM23-223	ENST00000556838	CBWD3	Q5JTY5	395 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms