RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PROM1O43490 865 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 VPS4BO75351 444 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 GRPP07492 148 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 BRAFP15056 766 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 ZKSCAN1P17029 563 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-213ENST00000554776 CHRM3P20309 590 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 BMP5P22003 454 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 TNFSF4P23510 183 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 GATA3P23771 443 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 KCNJ5P48544 419 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SLC11A2P49281 568 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 FMO1Q01740 532 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 FPGSQ05932 587 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 CHAF1AQ13111 956 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-213ENST00000554776 IFIT5Q13325 482 aaKnown RBP3.81□□□□□ -1.8
SCFD1-213ENST00000554776 POLD3Q15054 466 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SF3B3Q15393 1217 aaKnown RBP3.81□□□□□ -1.8
SCFD1-213ENST00000554776 CD300EQ496F6 205 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-213ENST00000554776 PRR16Q569H4 304 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 C3orf38Q5JPI3 329 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 KLHDC7AQ5VTJ3 777 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 KIAA0895LQ68EN5 471 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 VWA1Q6PCB0 445 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SLC30A10Q6XR72 485 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 TSHZ1Q6ZSZ6 1077 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 TOGARAM2Q6ZUX3 1019 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 MICALCLQ6ZW33 695 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 C11orf96Q7Z7L8 435 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SESTD1Q86VW0 696 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 KRT78Q8N1N4 520 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 FAM46DQ8NEK8 389 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SNX19Q92543 992 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 MAML1Q92585 1016 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 PHKBQ93100 1093 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 ZG16BQ96DA0 208 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SGCZQ96LD1 299 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SPATA5L1Q9BVQ7 753 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 LRRC27Q9C0I9 530 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SMURF2Q9HAU4 748 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 ZNF287Q9HBT7 754 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 STK32BQ9NY57 414 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 CDC23Q9UJX2 597 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 OGDHLQ9ULD0 1010 aa3.81□□□□□ -1.8
SCFD1-213ENST00000554776 SPATA31A3Q5VYP0 1347 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 A0A087WWL8 130 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 POM121BA6NF01 834 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 F5H423 210 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-213ENST00000554776 SOAT2O75908 522 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 SETSIPP0DME0 302 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ABCB4P21439 1286 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 PLA2G5P39877 138 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 FOLR3P41439 243 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 NPTX2P47972 431 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 CLK3P49761 638 aaKnown RBP3.8□□□□□ -1.8
SCFD1-213ENST00000554776 NDUFV1P49821 464 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ZNF134P52741 427 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 UCP3P55916 312 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ZNF543Q08ER8 600 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 STK3Q13188 491 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ZNF169Q14929 603 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-213ENST00000554776 CNGA2Q16280 664 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 PREPLQ4J6C6 727 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-213ENST00000554776 FAM209BQ5JX69 171 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 FAM83BQ5T0W9 1011 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ZNF783Q6ZMS7 281 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 FAM9AQ8IZU1 332 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-213ENST00000554776 CCDC33Q8N5R6 958 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ACRBPQ8NEB7 543 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 SLC30A5Q8TAD4 765 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 KIAA1191Q96A73 305 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 PDLIM2Q96JY6 352 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 SLC46A1Q96NT5 459 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 OSBPL9Q96SU4 736 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 HEPHQ9BQS7 1158 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 SACM1LQ9NTJ5 587 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 GJB4Q9NTQ9 266 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 FOXJ2Q9P0K8 574 aa3.8□□□□□ -1.8
SCFD1-213ENST00000554776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCFD1-213ENST00000554776 ABHD14A-ACY1A0A1B0GW23 586 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 ZAR1LA6NP61 321 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 ISM1B1AKI9 464 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 RASA4BC9J798 803 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 IFRD1O00458 451 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-213ENST00000554776 BTN3A1O00481 513 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 KIAA0355O15063 1070 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 YY2O15391 372 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 MPPED1O15442 326 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 RASA4O43374 803 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 PEX1O43933 1283 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 EIF3JO75822 258 aaKnown RBP3.79□□□□□ -1.8
SCFD1-213ENST00000554776 THP07101 528 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 PPP3CBP16298 524 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 CXCR5P32302 372 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 VIPR2P41587 438 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 STT3AP46977 705 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 TM4SF4P48230 202 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 GCLCP48506 637 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-213ENST00000554776 CASP5P51878 434 aa3.79□□□□□ -1.8
SCFD1-213ENST00000554776 NANOS3P60323 173 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms