RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 MTCL1Q9Y4B5 1905 aaKnown RBP14.72□□□□□ -0.05
TUBB3-202ENST00000553656 LRRC10BA6NIK2 292 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 VNN2O95498 520 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 RFX1P22670 979 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 BDNFP23560 247 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 CYP2F1P24903 491 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 ANXA13P27216 316 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 MAGEA11P43364 429 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 CBX2Q14781 532 aaPredicted RBP14.72□□□□□ -0.05
TUBB3-202ENST00000553656 CCDC142Q17RM4 750 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 TMEM270Q6UE05 265 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 VSTM1Q6UX27 236 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 ITIH5Q86UX2 942 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.72□□□□□ -0.05
TUBB3-202ENST00000553656 SCN4BQ8IWT1 228 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 TTC9BQ8N6N2 239 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 RNF214Q8ND24 703 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.72□□□□□ -0.05
TUBB3-202ENST00000553656 KAT5Q92993 513 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 ZNF512Q96ME7 567 aaPredicted RBP14.72□□□□□ -0.05
TUBB3-202ENST00000553656 HEXIM2Q96MH2 286 aaKnown RBP14.72□□□□□ -0.05
TUBB3-202ENST00000553656 TWNKQ96RR1 684 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 RHOBTB2Q9BYZ6 727 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 CRISPLD1Q9H336 500 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 FAM49BQ9NUQ9 324 aa14.72□□□□□ -0.05
TUBB3-202ENST00000553656 GRXCR2A6NFK2 248 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 TRIM66O15016 1216 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 SOAT2O75908 522 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 CCDC130P13994 396 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 CD19P15391 556 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 GRIK1P39086 918 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 RAD23BP54727 409 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 SYCP1Q15431 976 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 ARHGAP44Q17R89 818 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 GJB7Q6PEY0 223 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-202ENST00000553656 WHAMMQ8TF30 809 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 ZNF707Q96C28 371 aaPredicted RBP14.71□□□□□ -0.05
TUBB3-202ENST00000553656 SMARCD1Q96GM5 515 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 KREMEN1Q96MU8 473 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 ASB2Q96Q27 587 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 LPIN3Q9BQK8 851 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 B3GNT5Q9BYG0 378 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 ZNF518BQ9C0D4 1074 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 DNAJC12Q9UKB3 198 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 ASB3Q9Y575 518 aa14.71□□□□□ -0.05
TUBB3-202ENST00000553656 CLDN5O00501 218 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 SLC34A2O95436 690 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 TPM3P06753 285 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 PAEPP09466 180 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 FAM200BP0CF97 657 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 PTPN2P17706 415 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 ADORA2BP29275 332 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 USP8P40818 1118 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 KCNQ1P51787 676 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 FANCCQ00597 558 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 KCNMA1Q12791 1236 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 RAPGEF1Q13905 1077 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 SMAD2Q15796 467 aaKnown RBP14.7□□□□□ -0.06
TUBB3-202ENST00000553656 PABPC1LQ4VXU2 614 aaKnown RBP14.7□□□□□ -0.06
TUBB3-202ENST00000553656 CYP4A22Q5TCH4 519 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 APTXQ7Z2E3 356 aaKnown RBP14.7□□□□□ -0.06
TUBB3-202ENST00000553656 GRASPQ7Z6J2 395 aaPredicted RBP14.7□□□□□ -0.06
TUBB3-202ENST00000553656 FAM35AQ86V20 835 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 C12orf29Q8N999 325 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 SLC4A11Q8NBS3 891 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 LEMD2Q8NC56 503 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 NEK11Q8NG66 645 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 SLC2A14Q8TDB8 520 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 SUSD6Q92537 303 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 CYFIP2Q96F07 1278 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 CORO1BQ9BR76 489 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 SIX2Q9NPC8 291 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 PLCB1Q9NQ66 1216 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 ASAH2Q9NR71 780 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 KRT82Q9NSB4 513 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 FAM207AQ9NSI2 230 aaPredicted RBP14.7□□□□□ -0.06
TUBB3-202ENST00000553656 KIAA1257Q9ULG3 409 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 DAAM1Q9Y4D1 1078 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 BRWD1Q9NSI6 2320 aa14.7□□□□□ -0.06
TUBB3-202ENST00000553656 CLUHO75153 1309 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 AP1G2O75843 785 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 PAPLNO95428 1278 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 VDRP11473 427 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 UCHL3P15374 230 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 ATF6P18850 670 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 ACO1P21399 889 aaKnown RBP14.69□□□□□ -0.06
TUBB3-202ENST00000553656 UBASH3AP57075 661 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 SLC8A3P57103 927 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 APBA1Q02410 837 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 DDR2Q16832 855 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 SGO2Q562F6 1265 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 KLHDC7AQ5VTJ3 777 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 SMYD5Q6GMV2 418 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 PDZD4Q76G19 769 aaPredicted RBP14.69□□□□□ -0.06
TUBB3-202ENST00000553656 FUKQ8N0W3 1084 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 UBR7Q8N806 425 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 GIPC2Q8TF65 315 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
TUBB3-202ENST00000553656 CEP295NLQ96MC4 621 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms